RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 CCPG1Q9ULG6 757 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 IQGAP3Q86VI3 1631 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 KCNQ3O43525 872 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 SYT17Q9BSW7 474 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 PPP2R3BQ9Y5P8 575 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 CFBP00751 764 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 SMTNP53814 917 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 ANKRD44Q8N8A2 993 aa8.55□□□□□ -1.04
SH3D19-203ENST00000409598 CIAO1O76071 339 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 SUCLG2Q96I99 432 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ORC3Q9UBD5 711 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ZBTB21Q9ULJ3 1066 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 FDX1P10109 184 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ZSCAN20P17040 1043 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 SCARF1Q14162 830 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 DHX8Q14562 1220 aaKnown RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 MTERF4Q7Z6M4 381 aaKnown RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ARHGEF37A1IGU5 675 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 GCOM1H8Y6P7 765 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-203ENST00000409598 POLR2MP0CAP2 368 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 SLFN13Q68D06 897 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 NRBP2Q9NSY0 501 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 ATP8A2Q9NTI2 1148 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 PREX1Q8TCU6 1659 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 OTUD6AQ7L8S5 288 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 GPC2Q8N158 579 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 FERMT1Q9BQL6 677 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 SERPINB13Q9UIV8 391 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 DLC1Q96QB1 1528 aa8.54□□□□□ -1.04
SH3D19-203ENST00000409598 BIRC2Q13490 618 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KRT79Q5XKE5 535 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 MIGA2Q7L4E1 593 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 NT5C2P49902 561 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 PPP2R5BQ15173 497 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 IGSF3O75054 1194 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KRT13P13646 458 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 STRN3Q13033 797 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 CCDC102BQ68D86 513 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 RNF169Q8NCN4 708 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 BCORL1Q5H9F3 1711 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 NRXN1Q9ULB1 1477 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 NASPP49321 788 aaPredicted RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KIAA1841Q6NSI8 718 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 EXOC4Q96A65 974 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 SPATA32Q96LK8 384 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
SH3D19-203ENST00000409598 SEPT11Q9NVA2 429 aaKnown RBP8.53□□□□□ -1.04
SH3D19-203ENST00000409598 KLF18A0A0U1RQI7 1052 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 NACA2Q9H009 215 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 CD209Q9NNX6 404 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 RABGAP1Q9Y3P9 1069 aa8.52□□□□□ -1.04
SH3D19-203ENST00000409598 FAM13AO94988 1023 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 FCER1AP12319 257 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 KRT85P78386 507 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 TFAP4Q01664 338 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 ADPGKQ9BRR6 497 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 PKD2L1Q9P0L9 805 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 ESPNB1AK53 854 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L15C9J2P7 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L13C9JLJ4 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L11C9JVI0 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L18D6R9N7 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L22D6RA61 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L17D6RBQ6 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L19D6RCP7 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L20D6RJB6 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 IDEP14735 1019 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USP17L24Q0WX57 530 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 MRVI1Q9Y6F6 885 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 SLIT1O75093 1534 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 TESPA1A2RU30 521 aaPredicted RBP8.52□□□□□ -1.05
SH3D19-203ENST00000409598 C19orf81C9J6K1 198 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 CTCFP49711 727 aaPredicted RBP8.52□□□□□ -1.05
SH3D19-203ENST00000409598 LAMC1P11047 1609 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 REREQ9P2R6 1566 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 MYL3P08590 195 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 MARCKSP29966 332 aaPredicted RBP8.52□□□□□ -1.05
SH3D19-203ENST00000409598 USH1GQ495M9 461 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 FBXO11Q86XK2 927 aa8.52□□□□□ -1.05
SH3D19-203ENST00000409598 MSANTD4Q8NCY6 345 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms