RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 MINDY4BA8MYZ0 360 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 FGRP09769 529 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 POTEIP0CG38 1075 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 POTEJP0CG39 1038 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 CYP2D6P10635 497 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 NT5C2P49902 561 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 GABPAQ06546 454 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 KRT26Q7Z3Y9 468 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 DOCK1Q14185 1865 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 SSC5DA1L4H1 1573 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 SLC3A2P08195 630 aaKnown RBP24.32■■□□□ 1.48
VSX1-203ENST00000409285 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
VSX1-203ENST00000409285 MAP3K10Q02779 954 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 CDC37L1Q7L3B6 337 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 ZSCAN29Q8IWY8 852 aaPredicted RBP24.32■■□□□ 1.48
VSX1-203ENST00000409285 STAG1Q8WVM7 1258 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 HOOK2Q96ED9 719 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 TBC1D32Q96NH3 1257 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 C22orf23Q9BZE7 217 aa24.32■■□□□ 1.48
VSX1-203ENST00000409285 HERC5Q9UII4 1024 aaKnown RBP24.32■■□□□ 1.48
VSX1-203ENST00000409285 TBC1D12O60347 775 aa24.31■■□□□ 1.48
VSX1-203ENST00000409285 HAND2P61296 217 aa24.31■■□□□ 1.48
VSX1-203ENST00000409285 C16orf86Q6ZW13 317 aa24.31■■□□□ 1.48
VSX1-203ENST00000409285 FOXP4Q8IVH2 680 aaPredicted RBP24.31■■□□□ 1.48
VSX1-203ENST00000409285 RNF41Q9H4P4 317 aaPredicted RBP24.31■■□□□ 1.48
VSX1-203ENST00000409285 EVX2Q03828 476 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 KRT32Q14532 448 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 AKNAD1Q5T1N1 836 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 TBC1D10CQ8IV04 446 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 RASEFQ8IZ41 740 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 SWAP70Q9UH65 585 aa24.3■■□□□ 1.48
VSX1-203ENST00000409285 SCAF8Q9UPN6 1271 aaKnown RBP24.3■■□□□ 1.48
VSX1-203ENST00000409285 C1QTNF8P60827 252 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 CDAN1Q8IWY9 1227 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 SMC1BQ8NDV3 1235 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 ZNF287Q9HBT7 754 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 CLEC11AQ9Y240 323 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.29■■□□□ 1.48
VSX1-203ENST00000409285 SNX14Q9Y5W7 946 aa24.29■■□□□ 1.48
VSX1-203ENST00000409285 ADM5C9JUS6 153 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 SMIM22K7EJ46 135 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 CTDSPL2Q05D32 466 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 PDE4BQ07343 736 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 SLC4A8Q2Y0W8 1093 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 TAF6LQ9Y6J9 622 aa24.28■■□□□ 1.48
VSX1-203ENST00000409285 ORC4O43929 436 aa24.27■■□□□ 1.48
VSX1-203ENST00000409285 SUPT20HL1Q3ZLR7 823 aa24.27■■□□□ 1.48
VSX1-203ENST00000409285 MFSD6Q6ZSS7 791 aa24.27■■□□□ 1.48
VSX1-203ENST00000409285 DNAJC18Q9H819 358 aa24.27■■□□□ 1.48
VSX1-203ENST00000409285 CNNM2Q9H8M5 875 aa24.27■■□□□ 1.48
VSX1-203ENST00000409285 E7EWF7 191 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 FSTL1Q12841 308 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 NBPF12Q5TAG4 269 aaPredicted RBP24.26■■□□□ 1.47
VSX1-203ENST00000409285 TATDN1Q6P1N9 297 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 STOX1Q6ZVD7 989 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 CRACR2BQ8N4Y2 399 aaPredicted RBP24.26■■□□□ 1.47
VSX1-203ENST00000409285 GLIS2Q9BZE0 524 aaPredicted RBP24.26■■□□□ 1.47
VSX1-203ENST00000409285 MYH4Q9Y623 1939 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 CDK8P49336 464 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 MAP1SQ66K74 1059 aaPredicted RBP24.26■■□□□ 1.47
VSX1-203ENST00000409285 CHADLQ6NUI6 762 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 DYNLL2Q96FJ2 89 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 TACC3Q9Y6A5 838 aa24.26■■□□□ 1.47
VSX1-203ENST00000409285 NEDD4P46934 1319 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 SHMT1P34896 483 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 DCAF15Q66K64 600 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 USP48Q86UV5 1035 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 PHIPQ8WWQ0 1821 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 CDCA5Q96FF9 252 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 TM6SF1Q9BZW5 370 aa24.25■■□□□ 1.47
VSX1-203ENST00000409285 PLIN4Q96Q06 1357 aa24.24■■□□□ 1.47
VSX1-203ENST00000409285 TRIM34Q9BYJ4 488 aa24.24■■□□□ 1.47
VSX1-203ENST00000409285 KRT23Q9C075 422 aa24.24■■□□□ 1.47
VSX1-203ENST00000409285 TRDNQ13061 729 aa24.23■■□□□ 1.47
VSX1-203ENST00000409285 SLC44A5Q8NCS7 719 aa24.23■■□□□ 1.47
VSX1-203ENST00000409285 NCOA7Q8NI08 942 aa24.23■■□□□ 1.47
VSX1-203ENST00000409285 HMGB1P09429 215 aaKnown RBP24.22■■□□□ 1.47
VSX1-203ENST00000409285 RASA1P20936 1047 aa24.22■■□□□ 1.47
VSX1-203ENST00000409285 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
VSX1-203ENST00000409285 KIF2CQ99661 725 aa24.22■■□□□ 1.47
VSX1-203ENST00000409285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.22■■□□□ 1.47
VSX1-203ENST00000409285 PSMA5P28066 241 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 NF2P35240 595 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 PRAMEF18Q5VWM3 479 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 RALYLQ86SE5 291 aaKnown RBP24.21■■□□□ 1.47
VSX1-203ENST00000409285 IL27Q8NEV9 243 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 ESR2Q92731 530 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 CCDC17Q96LX7 622 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 NEK1Q96PY6 1258 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 MKNK2Q9HBH9 465 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 WDR19Q8NEZ3 1342 aa24.21■■□□□ 1.47
VSX1-203ENST00000409285 ITGBL1O95965 494 aaPredicted RBP24.2■■□□□ 1.47
VSX1-203ENST00000409285 MB21D2Q8IYB1 491 aaPredicted RBP24.2■■□□□ 1.47
VSX1-203ENST00000409285 ZNF341Q9BYN7 854 aa24.2■■□□□ 1.47
VSX1-203ENST00000409285 INCENPQ9NQS7 918 aa24.2■■□□□ 1.47
VSX1-203ENST00000409285 ZNF112Q9UJU3 913 aa24.2■■□□□ 1.47
VSX1-203ENST00000409285 FAM196BA6NMK8 535 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 PHF20L1A8MW92 1017 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 MIGA2Q7L4E1 593 aa24.19■■□□□ 1.46
VSX1-203ENST00000409285 JAKMIP1Q96N16 626 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms