RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
RAB1C-201ENST00000409159 GPC2Q8N158 579 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 ANKS1AQ92625 1134 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 BRF1Q92994 677 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 UBAC1Q9BSL1 405 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 CHMP5Q9NZZ3 219 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 PSME4Q14997 1843 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
RAB1C-201ENST00000409159 PRELPP51888 382 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 CYB5R4Q7L1T6 521 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
RAB1C-201ENST00000409159 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
RAB1C-201ENST00000409159 CCDC17Q96LX7 622 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
RAB1C-201ENST00000409159 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
RAB1C-201ENST00000409159 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 NID2Q14112 1375 aa13.19□□□□□ -0.3
RAB1C-201ENST00000409159 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
RAB1C-201ENST00000409159 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 CYP2D7A0A087X1C5 515 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
RAB1C-201ENST00000409159 CDK8P49336 464 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 PLCD1P51178 756 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 NUCB2P80303 420 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 SYNE3Q6ZMZ3 975 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 GTF3C6Q969F1 213 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 ZSCAN10Q96SZ4 725 aaPredicted RBP13.18□□□□□ -0.3
RAB1C-201ENST00000409159 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 DDX4Q9NQI0 724 aaKnown RBP13.18□□□□□ -0.3
RAB1C-201ENST00000409159 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 ZNF70Q9UC06 446 aaPredicted RBP13.18□□□□□ -0.3
RAB1C-201ENST00000409159 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
RAB1C-201ENST00000409159 H7C1D1 291 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 CALM1P0DP23 149 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 CALM2P0DP24 149 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 CALM3P0DP25 149 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 CYP2D6P10635 497 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 YBX3P16989 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 GMPSP49915 693 aaPredicted RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 TNFAIP1Q13829 316 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 COL9A3Q14050 684 aaPredicted RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 WTAPQ15007 396 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 SEC23AQ15436 765 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 RRP12Q5JTH9 1297 aaKnown RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 MAP3K14Q99558 947 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 HERC5Q9UII4 1024 aaKnown RBP13.17□□□□□ -0.3
RAB1C-201ENST00000409159 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
RAB1C-201ENST00000409159 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 TBC1D12O60347 775 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 RASA1P20936 1047 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 PDCP20941 246 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 NOVP48745 357 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 TNNI2P48788 182 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 NFIAQ12857 509 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 PICALMQ13492 652 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
RAB1C-201ENST00000409159 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
RAB1C-201ENST00000409159 CNOT7Q9UIV1 285 aaKnown RBP13.16□□□□□ -0.3
RAB1C-201ENST00000409159 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
RAB1C-201ENST00000409159 TNKSO95271 1327 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 WNT10BO00744 389 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 CDKL5O76039 1030 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 DDAH1O94760 285 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 TFAP4Q01664 338 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 CHST3Q7LGC8 479 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 INCENPQ9NQS7 918 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
RAB1C-201ENST00000409159 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
RAB1C-201ENST00000409159 ZBTB43O43298 467 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 LARGE1O95461 756 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 TSPY3P0CV98 308 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 TSPY8P0CW00 308 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
RAB1C-201ENST00000409159 GPR162Q16538 588 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms