RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 RFX7Q2KHR2 1363 aa15.21■□□□□ 0.02
APOBEC3B-204ENST00000407298 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 RPTORQ8N122 1335 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 GPR75-ASB3A0A0A6YYF3 556 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 RASGRF1Q13972 1273 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 MVPQ14764 893 aaKnown RBP15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 DDX4Q9NQI0 724 aaKnown RBP15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
APOBEC3B-204ENST00000407298 CUL9Q8IWT3 2517 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 COL6A3P12111 3177 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 ADORA1P30542 326 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 SPP2Q13103 211 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 GDF15Q99988 308 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 AS3MTQ9HBK9 375 aa15.19■□□□□ 0.02
APOBEC3B-204ENST00000407298 DOCK1Q14185 1865 aa15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 SOX1O00570 391 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 TIMM10P62072 90 aa15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 MECOMQ03112 1051 aa15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 C7orf61Q8IZ16 206 aa15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 API5Q9BZZ5 524 aaKnown RBP15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
APOBEC3B-204ENST00000407298 PTPRFP10586 1907 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 DOCK3Q8IZD9 2030 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 CAP2P40123 477 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 HMGCS2P54868 508 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 RHBDL3P58872 404 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 GORABQ5T7V8 394 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 XAGE2Q96GT9 111 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 C11orf49Q9H6J7 331 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 GJD2Q9UKL4 321 aa15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
APOBEC3B-204ENST00000407298 PHIPQ8WWQ0 1821 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 A0A1B0GUL7 405 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 CT47B1P0C2W7 299 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 LRIT3Q3SXY7 679 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 DEFB123Q8N688 67 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 DIS3LQ8TF46 1054 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 MORF4L1Q9UBU8 362 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 ZMYND8Q9ULU4 1186 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-204ENST00000407298 LAMA3Q16787 3333 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 XRCC5P13010 732 aaKnown RBP15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 NEUROD6Q96NK8 337 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 NUDT12Q9BQG2 462 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
APOBEC3B-204ENST00000407298 ASNSP08243 561 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 GNAI3P08754 354 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 PLCG2P16885 1265 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 HOXA7P31268 230 aaPredicted RBP15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 PDE3AQ14432 1141 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 TDHQ8IZJ6 230 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 SPATA5Q8NB90 893 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 GTF3C2Q8WUA4 911 aaPredicted RBP15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 NSUN4Q96CB9 384 aaKnown RBP15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 GINM1Q9NU53 330 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
APOBEC3B-204ENST00000407298 FAM196BA6NMK8 535 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 C19orf81C9J6K1 198 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 BAG3O95817 575 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 MAPK4P31152 587 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 MAGEA10P43363 369 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 BACE1P56817 501 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 TFCP2Q12800 502 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 MIER1Q8N108 512 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 UBE2OQ9C0C9 1292 aaKnown RBP15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
APOBEC3B-204ENST00000407298 SRGAP3O43295 1099 aa15.12■□□□□ 0.01
APOBEC3B-204ENST00000407298 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
APOBEC3B-204ENST00000407298 CYP2B6P20813 491 aa15.12■□□□□ 0.01
APOBEC3B-204ENST00000407298 MAP3K21Q5TCX8 1036 aa15.12■□□□□ 0.01
APOBEC3B-204ENST00000407298 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
APOBEC3B-204ENST00000407298 LOC285556D6RIA3 1793 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 USP17L10C9JJH3 530 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms