RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 PTPRAP18433 802 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 MAP3K10Q02779 954 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 DIXDC1Q155Q3 683 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 ALDH1L2Q3SY69 923 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 CAVIN4Q5BKX8 364 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 SLC4A10Q6U841 1118 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 SH3BP5LQ7L8J4 393 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 DEFB123Q8N688 67 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 KLHDC4Q8TBB5 520 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 YTHDC1Q96MU7 727 aaKnown RBP7.75□□□□□ -1.17
RPA3-204ENST00000406109 MTMR10Q9NXD2 777 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 TMOD2Q9NZR1 351 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
RPA3-204ENST00000406109 SLC45A1Q9Y2W3 748 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 ZHX2Q9Y6X8 837 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 ZBED9Q6R2W3 1325 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 KIF16BQ96L93 1317 aa7.75□□□□□ -1.17
RPA3-204ENST00000406109 MYH13Q9UKX3 1938 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 FRAT2O75474 233 aaPredicted RBP7.74□□□□□ -1.17
RPA3-204ENST00000406109 RARSP54136 660 aaKnown RBP7.74□□□□□ -1.17
RPA3-204ENST00000406109 LRIT3Q3SXY7 679 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 METTL24Q5JXM2 366 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 SRCIN1Q9C0H9 1055 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.74□□□□□ -1.17
RPA3-204ENST00000406109 GJD2Q9UKL4 321 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
RPA3-204ENST00000406109 STXBP5LQ9Y2K9 1186 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 TRANK1O15050 2925 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 MAST3O60307 1309 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 MYH2Q9UKX2 1941 aa7.74□□□□□ -1.17
RPA3-204ENST00000406109 PLXNB2O15031 1838 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 RFX7Q2KHR2 1363 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 TNPO2O14787 897 aaKnown RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 BCAR3O75815 825 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 CAPN2P17655 700 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 PRDX5P30044 214 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 MAGEA10P43363 369 aaPredicted RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 RFX5P48382 616 aaPredicted RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 TRIM32Q13049 653 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 PUM3Q15397 648 aaKnown RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 TREML2Q5T2D2 321 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 FASTKD5Q7L8L6 764 aaKnown RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 NECAB2Q7Z6G3 386 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 SCYL3Q8IZE3 742 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 ZMYND8Q9ULU4 1186 aaPredicted RBP7.73□□□□□ -1.17
RPA3-204ENST00000406109 PTPRCP08575 1304 aa7.73□□□□□ -1.17
RPA3-204ENST00000406109 MYO9BQ13459 2157 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 DDTLA6NHG4 134 aaPredicted RBP7.72□□□□□ -1.17
RPA3-204ENST00000406109 SYN1P17600 705 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 RGS3P49796 1198 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 GADL1Q6ZQY3 521 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 CCDC84Q86UT8 332 aaPredicted RBP7.72□□□□□ -1.17
RPA3-204ENST00000406109 C7orf61Q8IZ16 206 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 ANKRD13CQ8N6S4 541 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 ANKLE1Q8NAG6 615 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 WDR66Q8TBY9 1149 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
RPA3-204ENST00000406109 IDI2Q9BXS1 227 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.72□□□□□ -1.17
RPA3-204ENST00000406109 USP40Q9NVE5 1235 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 DOCK2Q92608 1830 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 WDFY4Q6ZS81 3184 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 PFASO15067 1338 aa7.72□□□□□ -1.17
RPA3-204ENST00000406109 DDX60LQ5H9U9 1706 aaKnown RBP7.72□□□□□ -1.17
RPA3-204ENST00000406109 DOCK1Q14185 1865 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 TRIM75PA6NK02 468 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 IPO8O15397 1037 aaKnown RBP7.71□□□□□ -1.18
RPA3-204ENST00000406109 CTNND1O60716 968 aaKnown RBP7.71□□□□□ -1.18
RPA3-204ENST00000406109 IFIT1P09914 478 aaKnown RBP7.71□□□□□ -1.18
RPA3-204ENST00000406109 FAM110CQ1W6H9 321 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 IER5LQ5T953 404 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 TDHQ8IZJ6 230 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 FAM212AQ96EL1 285 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 API5Q9BZZ5 524 aaKnown RBP7.71□□□□□ -1.18
RPA3-204ENST00000406109 USP44Q9H0E7 712 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 DDX4Q9NQI0 724 aaKnown RBP7.71□□□□□ -1.18
RPA3-204ENST00000406109 OGDHLQ9ULD0 1010 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 AGTPBP1Q9UPW5 1226 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 GAKO14976 1311 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 SALL1Q9NSC2 1324 aa7.71□□□□□ -1.18
RPA3-204ENST00000406109 LOC285556D6RIA3 1793 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 EYA2O00167 538 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 ENTPD3O75355 529 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 HMGCRP04035 888 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 LDHBP07195 334 aaKnown RBP7.7□□□□□ -1.18
RPA3-204ENST00000406109 COL6A1P12109 1028 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 RRP1BQ14684 758 aaKnown RBP7.7□□□□□ -1.18
RPA3-204ENST00000406109 MAP3K21Q5TCX8 1036 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 SMCR8Q8TEV9 937 aaPredicted RBP7.7□□□□□ -1.18
RPA3-204ENST00000406109 ZNF384Q8TF68 577 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 LPIN2Q92539 896 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 COA7Q96BR5 231 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 GUCD1Q96NT3 240 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 NBPF3Q9H094 633 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 PICK1Q9NRD5 415 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 TAOK2Q9UL54 1235 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 RPTORQ8N122 1335 aa7.7□□□□□ -1.18
RPA3-204ENST00000406109 COL2A1P02458 1487 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms