RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	MYH15	Q9Y2K3	1946 aa		33.8	■■■■□ 3
CSNK1E-205	ENST00000405675	CEBPZ	Q03701	1054 aa	Known RBP	33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	SEC23A	Q15436	765 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	PGBD1	Q96JS3	809 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	PSD	A5PKW4	1024 aa	Predicted RBP	33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	C21orf2	O43822	256 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	CDKL5	O76039	1030 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	NASP	P49321	788 aa	Predicted RBP	33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	TTLL6	Q8N841	843 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	EYA3	Q99504	573 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	UBAC1	Q9BSL1	405 aa		33.79	■■■■□ 3
CSNK1E-205	ENST00000405675	NID2	Q14112	1375 aa		33.78	■■■■□ 3
CSNK1E-205	ENST00000405675	ERICH2	A1L162	156 aa		33.78	■■■■□ 3
CSNK1E-205	ENST00000405675	CFAP45	Q9UL16	551 aa		33.78	■■■■□ 3
CSNK1E-205	ENST00000405675	LIG1	P18858	919 aa		33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	USP28	Q96RU2	1077 aa		33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	TNKS	O95271	1327 aa		33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	GTF2I	P78347	998 aa		33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	CPLX2	Q6PUV4	134 aa	Known RBP	33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	SYNE3	Q6ZMZ3	975 aa		33.77	■■■■□ 3
CSNK1E-205	ENST00000405675	ALG1	Q9BT22	464 aa		33.76	■■■■□ 3
CSNK1E-205	ENST00000405675	UBE2Q2L	H0YL09	131 aa		33.76	■■■□□ 2.99
CSNK1E-205	ENST00000405675	IGSF3	O75054	1194 aa		33.76	■■■□□ 2.99
CSNK1E-205	ENST00000405675	GSTO1	P78417	241 aa		33.76	■■■□□ 2.99
CSNK1E-205	ENST00000405675	MFSD14B	Q5SR56	506 aa		33.76	■■■□□ 2.99
CSNK1E-205	ENST00000405675	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.76	■■■□□ 2.99
CSNK1E-205	ENST00000405675	DLEC1	Q9Y238	1755 aa		33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675	FAM205A	Q6ZU69	1335 aa		33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675	SBK1	Q52WX2	424 aa		33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675	TMTC2	Q8N394	836 aa		33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675	MYH2	Q9UKX2	1941 aa		33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675	GOLGB1	Q14789	3259 aa	Known RBP	33.75	■■■□□ 2.99
CSNK1E-205	ENST00000405675		G3V3G9	751 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	IARS	P41252	1262 aa	Known RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	DCAF8	Q5TAQ9	597 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ZNF654	Q8IZM8	581 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ENAH	Q8N8S7	591 aa	Predicted RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	TSPY26P	Q9H489	355 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ARPP21	Q9UBL0	812 aa	Predicted RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	MKRN1	Q9UHC7	482 aa	Known RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	SNED1	Q8TER0	1413 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	KIF28P	B7ZC32	967 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	USP17L8	P0C7I0	530 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	PC	P11498	1178 aa	Known RBP	33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	CC2D2B	Q6DHV5	1058 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	RCOR1	Q9UKL0	485 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	KIF13B	Q9NQT8	1826 aa		33.74	■■■□□ 2.99
CSNK1E-205	ENST00000405675	LAMB1	P07942	1786 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	RTN1	Q16799	776 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ZNF396	Q96N95	335 aa	Predicted RBP	33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	MCM9	Q9NXL9	1143 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	MROH7-TTC4	A0A0A0MT08	1334 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	PPP4C	P60510	307 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	SLC4A8	Q2Y0W8	1093 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	FBXW7	Q969H0	707 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	DBNDD1	Q9H9R9	158 aa		33.73	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ECM29	Q5VYK3	1845 aa		33.72	■■■□□ 2.99
CSNK1E-205	ENST00000405675	GOLGA6L4	A6NEF3	574 aa		33.72	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ORC4	O43929	436 aa		33.72	■■■□□ 2.99
CSNK1E-205	ENST00000405675	TBC1D22A	Q8WUA7	517 aa		33.72	■■■□□ 2.99
CSNK1E-205	ENST00000405675	SLC26A6	Q9BXS9	759 aa		33.72	■■■□□ 2.99
CSNK1E-205	ENST00000405675	POLR3D	P05423	398 aa	Predicted RBP	33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	IFNAR1	P17181	557 aa		33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	KIF23	Q02241	960 aa	Predicted RBP	33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	ATL3	Q6DD88	541 aa		33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	NUP133	Q8WUM0	1156 aa		33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	TAOK2	Q9UL54	1235 aa		33.71	■■■□□ 2.99
CSNK1E-205	ENST00000405675	FMNL1	O95466	1100 aa	Predicted RBP	33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	LDHC	P07864	332 aa		33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	USP5	P45974	858 aa		33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	TGFB2	P61812	414 aa		33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	SGIP1	Q9BQI5	828 aa		33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	STK36	Q9NRP7	1315 aa		33.7	■■■□□ 2.99
CSNK1E-205	ENST00000405675	LETM1	O95202	739 aa	Predicted RBP	33.7	■■■□□ 2.98
CSNK1E-205	ENST00000405675	SSRP1	Q08945	709 aa	Known RBP	33.7	■■■□□ 2.98
CSNK1E-205	ENST00000405675	KRT40	Q6A162	431 aa		33.7	■■■□□ 2.98
CSNK1E-205	ENST00000405675	FANCB	Q8NB91	859 aa		33.7	■■■□□ 2.98
CSNK1E-205	ENST00000405675	BAG3	O95817	575 aa		33.69	■■■□□ 2.98
CSNK1E-205	ENST00000405675	CMTR1	Q8N1G2	835 aa	Known RBP	33.69	■■■□□ 2.98
CSNK1E-205	ENST00000405675	KCNQ5	Q9NR82	932 aa		33.69	■■■□□ 2.98
CSNK1E-205	ENST00000405675	RCAN1	P53805	252 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	FAM47A	Q5JRC9	791 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	RGS22	Q8NE09	1264 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	GUCY1A2	P33402	732 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	AOC3	Q16853	763 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	NBPF11	Q86T75	865 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	RNF214	Q8ND24	703 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	MXD3	Q9BW11	206 aa		33.68	■■■□□ 2.98
CSNK1E-205	ENST00000405675	BTD	P43251	543 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	C12orf60	Q5U649	245 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	PODN	Q7Z5L7	613 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	IQCA1	Q86XH1	822 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	BICD2	Q8TD16	824 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	TGFBRAP1	Q8WUH2	860 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	DACT1	Q9NYF0	836 aa		33.67	■■■□□ 2.98
CSNK1E-205	ENST00000405675	NMT2	O60551	498 aa		33.67	■■■□□ 2.98

Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms