RNA–Protein interactions for RNA: ENST00000400824.8

AFDN-208, Transcript of afadin, adherens junction formation factor, human

TSL 5

Gene AFDN, Length 875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-208	ENST00000400824	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	32.5	■■■□□ 2.79
AFDN-208	ENST00000400824	SRGAP3	O43295	1099 aa		32.49	■■■□□ 2.79
AFDN-208	ENST00000400824	TFRC	P02786	760 aa	Known RBP	32.49	■■■□□ 2.79
AFDN-208	ENST00000400824	MTX1	Q13505	466 aa		32.49	■■■□□ 2.79
AFDN-208	ENST00000400824	CRISPLD2	Q9H0B8	497 aa		32.49	■■■□□ 2.79
AFDN-208	ENST00000400824	COL2A1	P02458	1487 aa	Predicted RBP	32.48	■■■□□ 2.79
AFDN-208	ENST00000400824	ALPK3	Q96L96	1907 aa		32.48	■■■□□ 2.79
AFDN-208	ENST00000400824	MAP4K4	O95819	1239 aa	Predicted RBP	32.48	■■■□□ 2.79
AFDN-208	ENST00000400824	NSUN4	Q96CB9	384 aa	Known RBP	32.48	■■■□□ 2.79
AFDN-208	ENST00000400824	LDHC	P07864	332 aa		32.47	■■■□□ 2.79
AFDN-208	ENST00000400824	SPP2	Q13103	211 aa		32.47	■■■□□ 2.79
AFDN-208	ENST00000400824	NEUROD6	Q96NK8	337 aa		32.47	■■■□□ 2.79
AFDN-208	ENST00000400824	TAOK2	Q9UL54	1235 aa		32.47	■■■□□ 2.79
AFDN-208	ENST00000400824	GNAI3	P08754	354 aa		32.46	■■■□□ 2.79
AFDN-208	ENST00000400824	GSTO1	P78417	241 aa		32.46	■■■□□ 2.79
AFDN-208	ENST00000400824	PI16	Q6UXB8	463 aa		32.46	■■■□□ 2.79
AFDN-208	ENST00000400824	SPATA5	Q8NB90	893 aa		32.46	■■■□□ 2.79
AFDN-208	ENST00000400824	ZNF280C	Q8ND82	737 aa		32.46	■■■□□ 2.79
AFDN-208	ENST00000400824	EVI5	O60447	810 aa		32.45	■■■□□ 2.79
AFDN-208	ENST00000400824	TBC1D9	Q6ZT07	1266 aa		32.45	■■■□□ 2.79
AFDN-208	ENST00000400824	TBC1D2	Q9BYX2	928 aa		32.45	■■■□□ 2.79
AFDN-208	ENST00000400824	CAP2	P40123	477 aa		32.44	■■■□□ 2.78
AFDN-208	ENST00000400824	GCLC	P48506	637 aa	Predicted RBP	32.44	■■■□□ 2.78
AFDN-208	ENST00000400824	RRP1B	Q14684	758 aa	Known RBP	32.44	■■■□□ 2.78
AFDN-208	ENST00000400824	ARHGAP45	Q92619	1136 aa		32.44	■■■□□ 2.78
AFDN-208	ENST00000400824		A0A1W2PPC1	479 aa		32.43	■■■□□ 2.78
AFDN-208	ENST00000400824	RARS	P54136	660 aa	Known RBP	32.43	■■■□□ 2.78
AFDN-208	ENST00000400824	HMGCS2	P54868	508 aa		32.43	■■■□□ 2.78
AFDN-208	ENST00000400824	ARID4A	P29374	1257 aa	Predicted RBP	32.42	■■■□□ 2.78
AFDN-208	ENST00000400824	PAWR	Q96IZ0	340 aa	Known RBP	32.42	■■■□□ 2.78
AFDN-208	ENST00000400824	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	32.42	■■■□□ 2.78	8e-9	■■■■□ 23.9
AFDN-208	ENST00000400824	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
AFDN-208	ENST00000400824	SH3D19	Q5HYK7	790 aa		32.41	■■■□□ 2.78
AFDN-208	ENST00000400824	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.41	■■■□□ 2.78
AFDN-208	ENST00000400824	RAI14	Q9P0K7	980 aa		32.41	■■■□□ 2.78
AFDN-208	ENST00000400824	GJD2	Q9UKL4	321 aa		32.41	■■■□□ 2.78
AFDN-208	ENST00000400824	USP17L5	A8MUK1	530 aa		32.4	■■■□□ 2.78
AFDN-208	ENST00000400824	GORAB	Q5T7V8	394 aa		32.4	■■■□□ 2.78
AFDN-208	ENST00000400824	PLXNB2	O15031	1838 aa		32.4	■■■□□ 2.78
AFDN-208	ENST00000400824	SIPA1L1	O43166	1804 aa		32.4	■■■□□ 2.78
AFDN-208	ENST00000400824	HMGCR	P04035	888 aa		32.39	■■■□□ 2.78
AFDN-208	ENST00000400824	NECAB2	Q7Z6G3	386 aa		32.39	■■■□□ 2.78
AFDN-208	ENST00000400824	TEX11	Q8IYF3	940 aa		32.39	■■■□□ 2.78
AFDN-208	ENST00000400824	DIS3L	Q8TF46	1054 aa	Known RBP	32.39	■■■□□ 2.78
AFDN-208	ENST00000400824	HERC5	Q9UII4	1024 aa	Known RBP	32.39	■■■□□ 2.78
AFDN-208	ENST00000400824	MCAM	P43121	646 aa		32.38	■■■□□ 2.77
AFDN-208	ENST00000400824	ANKLE1	Q8NAG6	615 aa		32.37	■■■□□ 2.77
AFDN-208	ENST00000400824	AS3MT	Q9HBK9	375 aa		32.37	■■■□□ 2.77
AFDN-208	ENST00000400824	STAP2	Q9UGK3	403 aa		32.37	■■■□□ 2.77
AFDN-208	ENST00000400824	LAMA3	Q16787	3333 aa		32.37	■■■□□ 2.77
AFDN-208	ENST00000400824	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.36	■■■□□ 2.77
AFDN-208	ENST00000400824	PI4KB	Q9UBF8	816 aa		32.36	■■■□□ 2.77
AFDN-208	ENST00000400824	MORF4L1	Q9UBU8	362 aa		32.36	■■■□□ 2.77
AFDN-208	ENST00000400824	CDK5RAP2	Q96SN8	1893 aa		32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	RPTOR	Q8N122	1335 aa		32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	SOX1	O00570	391 aa	Predicted RBP	32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	UQCRFS1P1	P0C7P4	283 aa		32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	WDR18	Q9BV38	432 aa		32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	LRP2BP	Q9P2M1	347 aa		32.35	■■■□□ 2.77
AFDN-208	ENST00000400824	TRIM32	Q13049	653 aa		32.34	■■■□□ 2.77
AFDN-208	ENST00000400824	DHX36	Q9H2U1	1008 aa	Known RBP	32.34	■■■□□ 2.77
AFDN-208	ENST00000400824	PNMA6E	A0A0J9YXQ4	647 aa		32.33	■■■□□ 2.77
AFDN-208	ENST00000400824	GNAI2	P04899	355 aa		32.33	■■■□□ 2.77
AFDN-208	ENST00000400824	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.33	■■■□□ 2.77
AFDN-208	ENST00000400824	HMX1	Q9NP08	348 aa	Predicted RBP	32.33	■■■□□ 2.77
AFDN-208	ENST00000400824	MNX1	P50219	401 aa	Predicted RBP	32.32	■■■□□ 2.76
AFDN-208	ENST00000400824	BACE1	P56817	501 aa		32.32	■■■□□ 2.76
AFDN-208	ENST00000400824	NOL10	Q9BSC4	688 aa	Known RBP	32.32	■■■□□ 2.76
AFDN-208	ENST00000400824	FOCAD	Q5VW36	1801 aa		32.32	■■■□□ 2.76
AFDN-208	ENST00000400824	MAST2	Q6P0Q8	1798 aa		32.32	■■■□□ 2.76
AFDN-208	ENST00000400824	HOXA7	P31268	230 aa	Predicted RBP	32.31	■■■□□ 2.76
AFDN-208	ENST00000400824	MTMR2	Q13614	643 aa		32.31	■■■□□ 2.76
AFDN-208	ENST00000400824	GDF15	Q99988	308 aa		32.31	■■■□□ 2.76
AFDN-208	ENST00000400824	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
AFDN-208	ENST00000400824	DDX60L	Q5H9U9	1706 aa	Known RBP	32.31	■■■□□ 2.76
AFDN-208	ENST00000400824	ASNS	P08243	561 aa		32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	IRX3	P78415	501 aa	Predicted RBP	32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	JAG1	P78504	1218 aa		32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	TRIB2	Q92519	343 aa		32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	LRCH3	Q96II8	777 aa		32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	P2RX7	Q99572	595 aa	Known RBP	32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.3	■■■□□ 2.76
AFDN-208	ENST00000400824	BAG3	O95817	575 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	TRIM27	P14373	513 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	PPP4C	P60510	307 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	NAA16	Q6N069	864 aa	Predicted RBP	32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	METTL16	Q86W50	562 aa	Known RBP	32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	NBPF3	Q9H094	633 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	DNAJC18	Q9H819	358 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	TNN	Q9UQP3	1299 aa		32.29	■■■□□ 2.76
AFDN-208	ENST00000400824	PLCG2	P16885	1265 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	BMP8B	P34820	402 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	C7orf61	Q8IZ16	206 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	TGFBRAP1	Q8WUH2	860 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	SNRK	Q9NRH2	765 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	TMOD4	Q9NZQ9	345 aa		32.28	■■■□□ 2.76
AFDN-208	ENST00000400824	IPO8	O15397	1037 aa	Known RBP	32.27	■■■□□ 2.76
AFDN-208	ENST00000400824	CYP2B6	P20813	491 aa		32.27	■■■□□ 2.76
AFDN-208	ENST00000400824	MAP3K21	Q5TCX8	1036 aa		32.27	■■■□□ 2.76
AFDN-208	ENST00000400824	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.27	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms