RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 ARID3AQ99856 593 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 SLC26A6Q9BXS9 759 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 TACC3Q9Y6A5 838 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 AP5Z1O43299 807 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 RANBP6O60518 1105 aaKnown RBP12.44□□□□□ -0.42
LINC00649-202ENST00000400353 DEXIO95424 95 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
LINC00649-202ENST00000400353 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
LINC00649-202ENST00000400353 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 CEP57L1Q8IYX8 460 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 ECM29Q5VYK3 1845 aa12.44□□□□□ -0.42
LINC00649-202ENST00000400353 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
LINC00649-202ENST00000400353 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
LINC00649-202ENST00000400353 PLA2G4DQ86XP0 818 aa12.43□□□□□ -0.42
LINC00649-202ENST00000400353 NKX2-3Q8TAU0 364 aa12.43□□□□□ -0.42
LINC00649-202ENST00000400353 ZNF830Q96NB3 372 aaPredicted RBP12.43□□□□□ -0.42
LINC00649-202ENST00000400353 SDF4Q9BRK5 362 aa12.43□□□□□ -0.42
LINC00649-202ENST00000400353 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00649-202ENST00000400353 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
LINC00649-202ENST00000400353 DUOX1Q9NRD9 1551 aa12.43□□□□□ -0.42
LINC00649-202ENST00000400353 FAM237AA0A1B0GTK4 181 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 FGRP09769 529 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 CALM1P0DP23 149 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 CALM2P0DP24 149 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 CALM3P0DP25 149 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 RXRAP19793 462 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 ZNF75DP51815 510 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 IQCB1Q15051 598 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 ZNF654Q8IZM8 581 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 PHKBQ93100 1093 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 CRNKL1Q9BZJ0 848 aaKnown RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 SLC3A2P08195 630 aaKnown RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 ADRA2BP18089 450 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 NDUFA8P51970 172 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 SEC23AQ15436 765 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 AXDND1Q5T1B0 1012 aaPredicted RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 ADGRA1Q86SQ6 560 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 CCDC144CPQ8IYA2 1237 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 BPIFA3Q9BQP9 254 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 FOXP1Q9H334 677 aaPredicted RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 RBM28Q9NW13 759 aaKnown RBP12.42□□□□□ -0.42
LINC00649-202ENST00000400353 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
LINC00649-202ENST00000400353 A0A1B0GVL5 298 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 BECN2A8MW95 431 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 CUTAO60888 179 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 MMP1P03956 469 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 XBP1P17861 261 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 KCNQ4P56696 695 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 FANCBQ8NB91 859 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 SDR42E1Q8WUS8 393 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 MYL10Q9BUA6 226 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 ORC4O43929 436 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 RFC4P35249 363 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 PTPAQ15257 358 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 NOL10Q9BSC4 688 aaKnown RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
LINC00649-202ENST00000400353 MORC2Q9Y6X9 1032 aaPredicted RBP12.41□□□□□ -0.42
LINC00649-202ENST00000400353 TNKSO95271 1327 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 KIAA1551Q9HCM1 1747 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 DDAH1O94760 285 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 TRIM37O94972 964 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 ZNF202O95125 648 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 PFKFB1P16118 471 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
LINC00649-202ENST00000400353 MMP14P50281 582 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 DYNLL1P63167 89 aaKnown RBP12.4□□□□□ -0.42
LINC00649-202ENST00000400353 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC00649-202ENST00000400353 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 C11orf57Q6ZUT1 292 aaPredicted RBP12.4□□□□□ -0.42
LINC00649-202ENST00000400353 CATIPQ7Z7H3 387 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
LINC00649-202ENST00000400353 MRFAP1L1Q96HT8 127 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
LINC00649-202ENST00000400353 CEP131Q9UPN4 1083 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms