RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 FAM102BQ5T8I3 360 aa13.49□□□□□ -0.25
CACNA1C-213ENST00000399629 ZBTB33Q86T24 672 aa13.49□□□□□ -0.25
CACNA1C-213ENST00000399629 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 SMC6Q96SB8 1091 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 KCTD2Q14681 263 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 DHX32Q7L7V1 743 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 CCDC25Q86WR0 208 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 KCNG1Q9UIX4 513 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 ATP10BO94823 1461 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 SND1Q7KZF4 910 aaKnown RBP eCLIP13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 AFG3L2Q9Y4W6 797 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 MAP3K19Q56UN5 1328 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 SPOPO43791 374 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 DEXIO95424 95 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 TMOD1P28289 359 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 CD19P15391 556 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 TIMM10P62072 90 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 CTDSPL2Q05D32 466 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
CACNA1C-213ENST00000399629 RPRD2Q5VT52 1461 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 KIF11P52732 1056 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 CALCRLQ16602 461 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 PDCL2Q8N4E4 241 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 SOS1Q07889 1333 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 GCNT3O95395 438 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 PPP1R2P41236 205 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 FAM160B1Q5W0V3 765 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 BRAPQ7Z569 592 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 MRPL11Q9Y3B7 192 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 SBNO1A3KN83 1393 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 FLOT1O75955 427 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 TMEM87BQ96K49 555 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 CLSTN2Q9H4D0 955 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 CAVIN2O95810 425 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 TRIM7Q9C029 511 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 PRDM1O75626 825 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 ITIH3Q06033 890 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 GCKRQ14397 625 aa13.47□□□□□ -0.25
CACNA1C-213ENST00000399629 TICAM2Q86XR7 235 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 FAM107BQ9H098 131 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 CNPY2Q9Y2B0 182 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 GAS7O60861 476 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 MRPL44Q9H9J2 332 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 ADCY5O95622 1261 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 TPH2Q8IWU9 490 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 TSGA10Q9BZW7 698 aa13.46□□□□□ -0.25
CACNA1C-213ENST00000399629 SMIM23A6NLE4 172 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 KRT86O43790 486 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 TNNI1P19237 187 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 KCNA4P22459 653 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 PLCB4Q15147 1175 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 MTRF1LQ9UGC7 380 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 V9GY48 417 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-213ENST00000399629 POLR2MP0CAP2 368 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CTSWP56202 376 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 RNASELQ05823 741 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 NONOQ15233 471 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 ASIC2Q16515 512 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 SNX29Q8TEQ0 813 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CAPN9O14815 690 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 POLR3GO15318 223 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 GIMAP6Q6P9H5 292 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 C4orf50Q6ZRC1 276 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 C2orf69Q8N8R5 385 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 TNNC2P02585 160 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 ITKQ08881 620 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CCDC6Q16204 474 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms