RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 BRD1O95696 1058 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 IGHA2P01877 340 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 NPR3P17342 541 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 GDNFP39905 211 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 KIAA0319Q5VV43 1072 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 STK35Q8TDR2 534 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 ABCB6Q9NP58 842 aa5.04□□□□□ -1.6
CD47-203ENST00000398258 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
CD47-203ENST00000398258 TCAF2A6NFQ2 919 aa5.03□□□□□ -1.6
CD47-203ENST00000398258 EOMESO95936 686 aa5.03□□□□□ -1.6
CD47-203ENST00000398258 GSTP1P09211 210 aaKnown RBP5.03□□□□□ -1.6
CD47-203ENST00000398258 KCNC2Q96PR1 638 aa5.03□□□□□ -1.6
CD47-203ENST00000398258 DCP1AQ9NPI6 582 aaPredicted RBP5.03□□□□□ -1.6
CD47-203ENST00000398258 ADAMTS20P59510 1910 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 ZBTB7CA1YPR0 619 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 PATL2C9JE40 543 aaKnown RBP5.02□□□□□ -1.61
CD47-203ENST00000398258 OVOL3O00110 214 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 SLFN14P0C7P3 912 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 BMP7P18075 431 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 ERVFC1P60507 584 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 EHHADHQ08426 723 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 KCNA1Q09470 495 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 SKOR2Q2VWA4 1001 aaPredicted RBP5.02□□□□□ -1.61
CD47-203ENST00000398258 ZC3H12AQ5D1E8 599 aaKnown RBP5.02□□□□□ -1.61
CD47-203ENST00000398258 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
CD47-203ENST00000398258 HSPA12BQ96MM6 686 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 EPB41L4BQ9H329 900 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 PODXL2Q9NZ53 605 aa5.02□□□□□ -1.61
CD47-203ENST00000398258 CLCN7P51798 805 aa5.01□□□□□ -1.61
CD47-203ENST00000398258 MPRIPQ6WCQ1 1025 aa5.01□□□□□ -1.61
CD47-203ENST00000398258 PRDM10Q9NQV6 1147 aa5.01□□□□□ -1.61
CD47-203ENST00000398258 RNF214Q8ND24 703 aa5□□□□□ -1.61
CD47-203ENST00000398258 DDX54Q8TDD1 881 aaKnown RBP5□□□□□ -1.61
CD47-203ENST00000398258 NPHS2Q9NP85 383 aa5□□□□□ -1.61
CD47-203ENST00000398258 KRT82Q9NSB4 513 aa5□□□□□ -1.61
CD47-203ENST00000398258 GTF2IRD1Q9UHL9 959 aa5□□□□□ -1.61
CD47-203ENST00000398258 TRIM13O60858 407 aa4.99□□□□□ -1.61
CD47-203ENST00000398258 ALKBH2Q6NS38 261 aa4.99□□□□□ -1.61
CD47-203ENST00000398258 KCNN1Q92952 543 aa4.99□□□□□ -1.61
CD47-203ENST00000398258 EHD4Q9H223 541 aa4.99□□□□□ -1.61
CD47-203ENST00000398258 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
CD47-203ENST00000398258 GNEQ9Y223 722 aaKnown RBP4.99□□□□□ -1.61
CD47-203ENST00000398258 DNAJC25-GNG10A0A024R161 153 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 USP5P45974 858 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 PTPN12Q05209 780 aaKnown RBP4.98□□□□□ -1.61
CD47-203ENST00000398258 AAMPQ13685 434 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 PPM1JQ5JR12 505 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 RALGPS1Q5JS13 557 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 B4GALNT3Q6L9W6 998 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 PHLDB3Q6NSJ2 640 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 DNAJC25Q9H1X3 360 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 SP110Q9HB58 689 aa4.98□□□□□ -1.61
CD47-203ENST00000398258 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
CD47-203ENST00000398258 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 SYN1P17600 705 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 SSFA2P28290 1259 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 TRHRP34981 398 aaPredicted RBP4.97□□□□□ -1.61
CD47-203ENST00000398258 ERVK-24P63145 666 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 ORC1Q13415 861 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 NFIXQ14938 502 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
CD47-203ENST00000398258 PRPF40BQ6NWY9 871 aaKnown RBP4.97□□□□□ -1.61
CD47-203ENST00000398258 MARCH10Q8NA82 808 aaPredicted RBP4.97□□□□□ -1.61
CD47-203ENST00000398258 ABHD4Q8TB40 342 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 KCNB2Q92953 911 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 ST14Q9Y5Y6 855 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 CSADQ9Y600 493 aa4.97□□□□□ -1.61
CD47-203ENST00000398258 TMEM238LA0A1B0GVL6 79 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 H3BS24 57 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 SLITRK5O94991 958 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 SRFP11831 508 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 RING1Q06587 406 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 RPS26P11Q5JNZ5 115 aaPredicted RBP4.96□□□□□ -1.62
CD47-203ENST00000398258 CDKAL1Q5VV42 579 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 TXNDC2Q86VQ3 553 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 AEBP1Q8IUX7 1158 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 GPBAR1Q8TDU6 330 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 ALPK1Q96QP1 1244 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 MCOLN1Q9GZU1 580 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 XYLT2Q9H1B5 865 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 CACNA2D2Q9NY47 1150 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 RTEL1Q9NZ71 1219 aa4.96□□□□□ -1.62
CD47-203ENST00000398258 GNAT3A8MTJ3 354 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 PRRT2Q7Z6L0 340 aaPredicted RBP4.95□□□□□ -1.62
CD47-203ENST00000398258 TTC6Q86TZ1 520 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 NPAS4Q8IUM7 802 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 BAHD1Q8TBE0 780 aaPredicted RBP4.95□□□□□ -1.62
CD47-203ENST00000398258 SLC26A8Q96RN1 970 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 GCM1Q9NP62 436 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 ANO2Q9NQ90 1003 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 SLAMF8Q9P0V8 285 aa4.95□□□□□ -1.62
CD47-203ENST00000398258 WASH4PA8MWX3 477 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 DLG4P78352 724 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 ZNF252P-AS1Q0IIN9 211 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
CD47-203ENST00000398258 FOXQ1Q9C009 403 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 RNF32Q9H0A6 362 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 PRDM5Q9NQX1 630 aaPredicted RBP4.94□□□□□ -1.62
CD47-203ENST00000398258 MAPK8IP1Q9UQF2 711 aa4.94□□□□□ -1.62
CD47-203ENST00000398258 CAPN6Q9Y6Q1 641 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms