RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
SNRNP25-203ENST00000397876 ZNF512BQ96KM6 892 aaPredicted RBP17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 TBC1D2Q9BYX2 928 aa17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
SNRNP25-203ENST00000397876 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 BRCA2P51587 3418 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 IGSF3O75054 1194 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 RLBP1P12271 317 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 PRKCZQ05513 592 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 PROCA1Q8NCQ7 364 aaPredicted RBP17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 MGAMO43451 1857 aa17.49■□□□□ 0.39
SNRNP25-203ENST00000397876 LOC285556D6RIA3 1793 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 CAP2P40123 477 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 UBXN2AP68543 259 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 ZNF280CQ8ND82 737 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 BIN2Q9UBW5 565 aaPredicted RBP17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 MKI67P46013 3256 aaKnown RBP17.48■□□□□ 0.39
SNRNP25-203ENST00000397876 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 ZAP70P43403 619 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 PPP4CP60510 307 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 SPP2Q13103 211 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 PABPC4Q13310 644 aaKnown RBP eCLIP17.47■□□□□ 0.391e-8■■■■□ 20.3
SNRNP25-203ENST00000397876 MTFR1Q15390 333 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 TREML2Q5T2D2 321 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 NKX2-3Q8TAU0 364 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 AS3MTQ9HBK9 375 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 FLT1P17948 1338 aa17.47■□□□□ 0.39
SNRNP25-203ENST00000397876 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 CEP85Q6P2H3 762 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 ADGRA1Q86SQ6 560 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 MAPKAPK5Q8IW41 473 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 SIPA1L1O43166 1804 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 FOCADQ5VW36 1801 aa17.46■□□□□ 0.39
SNRNP25-203ENST00000397876 CCL5P13501 91 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 HMGCS2P54868 508 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 GABRQQ9UN88 632 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 CDK5RAP2Q96SN8 1893 aa17.45■□□□□ 0.38
SNRNP25-203ENST00000397876 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 ADCY3O60266 1144 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 ASNSP08243 561 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 CYP7A1P22680 504 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 FLT3LGP49771 235 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 COA7Q96BR5 231 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 SHISA4Q96DD7 197 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 RNF208Q9H0X6 261 aa17.44■□□□□ 0.38
SNRNP25-203ENST00000397876 GJB1P08034 283 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 GJA8P48165 433 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 GCLCP48506 637 aaPredicted RBP17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 SH3D19Q5HYK7 790 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 FOXP4Q8IVH2 680 aaPredicted RBP17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 PCDH10Q9P2E7 1040 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 EXOC6BQ9Y2D4 811 aa17.43■□□□□ 0.38
SNRNP25-203ENST00000397876 MS4A1P11836 297 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 IRF5Q13568 498 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 MTMR2Q13614 643 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 HABP4Q5JVS0 413 aaKnown RBP17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 AACSQ86V21 672 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 PANK1Q8TE04 598 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 PXYLP1Q8TE99 480 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 WDR18Q9BV38 432 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 DNAJC18Q9H819 358 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 TMOD4Q9NZQ9 345 aa17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 SAP30BPQ9UHR5 308 aaKnown RBP17.42■□□□□ 0.38
SNRNP25-203ENST00000397876 ELNP15502 786 aa17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 BACE1P56817 501 aa17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 MAP3K12Q12852 859 aa17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 TMED8Q6PL24 325 aaPredicted RBP17.41■□□□□ 0.38
SNRNP25-203ENST00000397876 MIGA1Q8NAN2 632 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms