RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 TBC1D2Q9BYX2 928 aa14.73□□□□□ -0.05
SYNE4-203ENST00000397428 CRISPLD2Q9H0B8 497 aa14.73□□□□□ -0.05
SYNE4-203ENST00000397428 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
SYNE4-203ENST00000397428 DOCK1Q14185 1865 aa14.73□□□□□ -0.05
SYNE4-203ENST00000397428 COL2A1P02458 1487 aaPredicted RBP14.72□□□□□ -0.05
SYNE4-203ENST00000397428 FAM196BA6NMK8 535 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 GNAI2P04899 355 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 INHAP05111 366 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 GCLCP48506 637 aaPredicted RBP14.72□□□□□ -0.05
SYNE4-203ENST00000397428 SH3D19Q5HYK7 790 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 GORABQ5T7V8 394 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 ZNF280CQ8ND82 737 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 COA7Q96BR5 231 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 PAK6Q9NQU5 681 aaPredicted RBP14.72□□□□□ -0.05
SYNE4-203ENST00000397428 NR2E3Q9Y5X4 410 aa14.72□□□□□ -0.05
SYNE4-203ENST00000397428 PNMA6EA0A0J9YXQ4 647 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 USP17L5A8MUK1 530 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 ZBTB7BO15156 539 aaPredicted RBP14.71□□□□□ -0.05
SYNE4-203ENST00000397428 FARP2O94887 1054 aaPredicted RBP14.71□□□□□ -0.05
SYNE4-203ENST00000397428 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
SYNE4-203ENST00000397428 UQCRFS1P1P0C7P4 283 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 MCAMP43121 646 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 PPP4CP60510 307 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.05
SYNE4-203ENST00000397428 FAM110CQ1W6H9 321 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 WDR18Q9BV38 432 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 RAI14Q9P0K7 980 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 PI4KBQ9UBF8 816 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.05
SYNE4-203ENST00000397428 GJD2Q9UKL4 321 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
SYNE4-203ENST00000397428 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 TRIM27P14373 513 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 METTL16Q86W50 562 aaKnown RBP14.7□□□□□ -0.06
SYNE4-203ENST00000397428 FOXP4Q8IVH2 680 aaPredicted RBP14.7□□□□□ -0.06
SYNE4-203ENST00000397428 SH3RF3Q8TEJ3 882 aaPredicted RBP14.7□□□□□ -0.06
SYNE4-203ENST00000397428 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 GPR108Q9NPR9 543 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 LRP2BPQ9P2M1 347 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 TNNQ9UQP3 1299 aa14.7□□□□□ -0.06
SYNE4-203ENST00000397428 IGSF3O75054 1194 aa14.69□□□□□ -0.06
SYNE4-203ENST00000397428 BCAR3O75815 825 aa14.69□□□□□ -0.06
SYNE4-203ENST00000397428 PABPC4Q13310 644 aaKnown RBP eCLIP14.69□□□□□ -0.06
SYNE4-203ENST00000397428 TEX11Q8IYF3 940 aa14.69□□□□□ -0.06
SYNE4-203ENST00000397428 ASCC2Q9H1I8 757 aaPredicted RBP14.69□□□□□ -0.06
SYNE4-203ENST00000397428 DHX36Q9H2U1 1008 aaKnown RBP14.69□□□□□ -0.06
SYNE4-203ENST00000397428 HOXA7P31268 230 aaPredicted RBP14.68□□□□□ -0.06
SYNE4-203ENST00000397428 HMGCS2P54868 508 aa14.68□□□□□ -0.06
SYNE4-203ENST00000397428 JAG1P78504 1218 aa14.68□□□□□ -0.06
SYNE4-203ENST00000397428 POLA2Q14181 598 aa14.68□□□□□ -0.06
SYNE4-203ENST00000397428 ZNF512BQ96KM6 892 aaPredicted RBP14.68□□□□□ -0.06
SYNE4-203ENST00000397428 MORF4L1Q9UBU8 362 aa14.68□□□□□ -0.06
SYNE4-203ENST00000397428 DOCK3Q8IZD9 2030 aa14.68□□□□□ -0.06
SYNE4-203ENST00000397428 CEP290O15078 2479 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 BAG3O95817 575 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 PLCG2P16885 1265 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 BACE1P56817 501 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 ATP8B2P98198 1209 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
SYNE4-203ENST00000397428 SSH3Q8TE77 659 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 AS3MTQ9HBK9 375 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
SYNE4-203ENST00000397428 LOC285556D6RIA3 1793 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 C19orf81C9J6K1 198 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 EVI5O60447 810 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 ASNSP08243 561 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 ANKLE1Q8NAG6 615 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 FRAT1Q92837 279 aaPredicted RBP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 CLUAP1Q96AJ1 413 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 P2RX7Q99572 595 aaKnown RBP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 NOL10Q9BSC4 688 aaKnown RBP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 AATFQ9NY61 560 aaKnown RBP eCLIP14.66□□□□□ -0.06
SYNE4-203ENST00000397428 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 RPTORQ8N122 1335 aa14.66□□□□□ -0.06
SYNE4-203ENST00000397428 ATAD5Q96QE3 1844 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 A0A1W2PPC1 479 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 HMGCRP04035 888 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
SYNE4-203ENST00000397428 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 NECAB2Q7Z6G3 386 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 DBNDD2Q9BQY9 259 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 RBPJLQ9UBG7 517 aa14.65□□□□□ -0.06
SYNE4-203ENST00000397428 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
SYNE4-203ENST00000397428 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
SYNE4-203ENST00000397428 TTC39AQ5SRH9 613 aa14.64□□□□□ -0.07
SYNE4-203ENST00000397428 TMEM57Q8N5G2 664 aa14.64□□□□□ -0.07
SYNE4-203ENST00000397428 HMX1Q9NP08 348 aaPredicted RBP14.64□□□□□ -0.07
SYNE4-203ENST00000397428 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
SYNE4-203ENST00000397428 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
SYNE4-203ENST00000397428 RANBP2P49792 3224 aaKnown RBP14.64□□□□□ -0.07
SYNE4-203ENST00000397428 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms