RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 KLHL34Q8N239 644 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 ESR2Q92731 530 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 UTRNP46939 3433 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 RASSF7Q02833 373 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 C16orf86Q6ZW13 317 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 AGBL3Q8NEM8 1001 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
TRIM39-204ENST00000396548 SAP30BPQ9UHR5 308 aaKnown RBP14.97□□□□□ -0.01
TRIM39-204ENST00000396548 COL2A1P02458 1487 aaPredicted RBP14.96□□□□□ -0.01
TRIM39-204ENST00000396548 BRD1O95696 1058 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 GABPAQ06546 454 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 STK11IPQ8N1F8 1099 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 TNPO1Q92973 898 aaKnown RBP14.96□□□□□ -0.01
TRIM39-204ENST00000396548 ZBED3Q96IU2 234 aaPredicted RBP14.96□□□□□ -0.01
TRIM39-204ENST00000396548 LLPHQ9BRT6 129 aaKnown RBP14.96□□□□□ -0.01
TRIM39-204ENST00000396548 FZD9O00144 591 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 GJB2P29033 226 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 NUCB2P80303 420 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 MTMR14Q8NCE2 650 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 MYH8P13535 1937 aa14.96□□□□□ -0.01
TRIM39-204ENST00000396548 KLF18A0A0U1RQI7 1052 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 PRDM1O75626 825 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 NFIAQ12857 509 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 NSUN7Q8NE18 718 aaKnown RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 FAM198AQ9UFP1 575 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 CFAP100Q494V2 611 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 TMEM67Q5HYA8 995 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 RRP12Q5JTH9 1297 aaKnown RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 APOA5Q6Q788 366 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 FAM217BQ9NTX9 383 aaPredicted RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 DTNBO60941 627 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 SLC3A2P08195 630 aaKnown RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 FGD1P98174 961 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 PDE4BQ07343 736 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 ENAHQ8N8S7 591 aaPredicted RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 ZSCAN10Q96SZ4 725 aaPredicted RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 ZKSCAN3Q9BRR0 538 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
TRIM39-204ENST00000396548 ZBTB12Q9Y330 459 aaPredicted RBP14.95□□□□□ -0.02
TRIM39-204ENST00000396548 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
TRIM39-204ENST00000396548 ZFPM1Q8IX07 1006 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 PRMT6Q96LA8 375 aaPredicted RBP14.94□□□□□ -0.02
TRIM39-204ENST00000396548 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
TRIM39-204ENST00000396548 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 RASA1P20936 1047 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 NFKBIBQ15653 356 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 IL17RBQ9NRM6 502 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 TNKSO95271 1327 aa14.94□□□□□ -0.02
TRIM39-204ENST00000396548 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 JAK2O60674 1132 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 NOVP48745 357 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SLC4A8Q2Y0W8 1093 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 ANKS1AQ92625 1134 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 POLR3DP05423 398 aaPredicted RBP14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SYT1P21579 422 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 RCAN1P53805 252 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 RCSD1Q6JBY9 416 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 CDK8P49336 464 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 CCT2P78371 535 aaKnown RBP14.93□□□□□ -0.02
TRIM39-204ENST00000396548 CIAPIN1Q6FI81 312 aa14.93□□□□□ -0.02
TRIM39-204ENST00000396548 PLIN4Q96Q06 1357 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 GOLGA8BA8MQT2 603 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 PICALMQ13492 652 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 WTAPQ15007 396 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 FAM47AQ5JRC9 791 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 METTL16Q86W50 562 aaKnown RBP14.92□□□□□ -0.02
TRIM39-204ENST00000396548 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 EHD4Q9H223 541 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
TRIM39-204ENST00000396548 FDPSP14324 419 aaKnown RBP14.92□□□□□ -0.02
TRIM39-204ENST00000396548 CDC27P30260 824 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 MMP14P50281 582 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 ZNF280AP59817 542 aaPredicted RBP14.92□□□□□ -0.02
TRIM39-204ENST00000396548 NTRK3Q16288 839 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 JDP2Q8WYK2 163 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 TOMM22Q9NS69 142 aa14.92□□□□□ -0.02
TRIM39-204ENST00000396548 NMT2O60551 498 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 TDRD3Q9H7E2 651 aaKnown RBP14.91□□□□□ -0.02
TRIM39-204ENST00000396548 CACNB3P54284 484 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
TRIM39-204ENST00000396548 TNIP1Q15025 636 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 UBAC1Q9BSL1 405 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRIM39-204ENST00000396548 MTMR6Q9Y217 621 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 CNTNAP1P78357 1384 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 MYH15Q9Y2K3 1946 aa14.91□□□□□ -0.02
TRIM39-204ENST00000396548 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 STX6O43752 255 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 ENTPD3O75355 529 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
TRIM39-204ENST00000396548 TFAP4Q01664 338 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 TTC6Q86TZ1 520 aa14.9□□□□□ -0.02
TRIM39-204ENST00000396548 DNAJC18Q9H819 358 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms