RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 GOLGA8BA8MQT2 603 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 GYG1P46976 350 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 TROAPQ12815 778 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 MYL10Q9BUA6 226 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 KLRG2A4D1S0 409 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 PPP6R2O75170 966 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 RXRAP19793 462 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 NOLC1Q14978 699 aaKnown RBP eCLIP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 APTXQ7Z2E3 356 aaKnown RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 METTL16Q86W50 562 aaKnown RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
HIF1A-203ENST00000394997 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
HIF1A-203ENST00000394997 A0A087X0B3 334 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CCZ1BP86790 482 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CCZ1P86791 482 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CCDC152Q4G0S7 254 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CTR9Q6PD62 1173 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 FBXO2Q9UK22 296 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CFAP45Q9UL16 551 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CCDC192P0DO97 292 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 KRT40Q6A162 431 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 VPS37DQ86XT2 251 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 RBM6P78332 1123 aaKnown RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 ENAHQ8N8S7 591 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 C16orf45Q96MC5 204 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 MMP1P03956 469 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 FGD1P98174 961 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 DPCR1Q3MIW9 517 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
HIF1A-203ENST00000394997 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
HIF1A-203ENST00000394997 UBAP1LF5GYI3 381 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 CMA1P23946 247 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 DYNLL1P63167 89 aaKnown RBP11.91□□□□□ -0.5
HIF1A-203ENST00000394997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-203ENST00000394997 CRACR2BQ8N4Y2 399 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-203ENST00000394997 TRIM5Q9C035 493 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 ARID5BQ14865 1188 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 TPD52L1Q16890 204 aaPredicted RBP11.91□□□□□ -0.5
HIF1A-203ENST00000394997 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 TNMDQ9H2S6 317 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 EDIL3O43854 480 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 PPARAQ07869 468 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 IL17AQ16552 155 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 PHF20Q9BVI0 1012 aa11.91□□□□□ -0.5
HIF1A-203ENST00000394997 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 A0A1B0GVL5 298 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 IDH1O75874 414 aaKnown RBP11.9□□□□□ -0.5
HIF1A-203ENST00000394997 PFKFB1P16118 471 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 SH3RF1Q7Z6J0 888 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 TMEM139Q8IV31 216 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
HIF1A-203ENST00000394997 MRFAP1L1Q96HT8 127 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 IL17RBQ9NRM6 502 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
HIF1A-203ENST00000394997 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 LRMPQ12912 555 aa11.9□□□□□ -0.5
HIF1A-203ENST00000394997 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
HIF1A-203ENST00000394997 SYTL4Q96C24 671 aaPredicted RBP11.9□□□□□ -0.5
HIF1A-203ENST00000394997 C4orf32Q8N8J7 132 aa11.9□□□□□ -0.51
HIF1A-203ENST00000394997 LRRC15Q8TF66 581 aa11.9□□□□□ -0.51
HIF1A-203ENST00000394997 TMX1Q9H3N1 280 aa11.9□□□□□ -0.51
HIF1A-203ENST00000394997 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.51
HIF1A-203ENST00000394997 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
HIF1A-203ENST00000394997 SMARCC1Q92922 1105 aaPredicted RBP11.89□□□□□ -0.51
HIF1A-203ENST00000394997 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
HIF1A-203ENST00000394997 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
HIF1A-203ENST00000394997 PDE4BQ07343 736 aa11.89□□□□□ -0.51
HIF1A-203ENST00000394997 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
HIF1A-203ENST00000394997 ANKS1AQ92625 1134 aa11.89□□□□□ -0.51
HIF1A-203ENST00000394997 MECOMQ03112 1051 aa11.89□□□□□ -0.51
HIF1A-203ENST00000394997 FOXN1O15353 648 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 ACTN4O43707 911 aaKnown RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 ORC4O43929 436 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 PTGS1P23219 599 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 PROM2Q8N271 834 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 CCDC112Q8NEF3 446 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 MRPS27Q92552 414 aaKnown RBP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 GNAT2P19087 354 aa11.88□□□□□ -0.51
HIF1A-203ENST00000394997 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF1A-203ENST00000394997 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms