RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 SRLQ86TD4 932 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 SAMSN1Q9NSI8 373 aaKnown RBP13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 PRC1O43663 620 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 STX10O60499 249 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
PDCD4-202ENST00000393104 TXLNAP40222 546 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 MORC3Q14149 939 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
PDCD4-202ENST00000393104 SPECC1Q5M775 1068 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 ELOA2Q8IYF1 753 aaPredicted RBP13.11□□□□□ -0.31
PDCD4-202ENST00000393104 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
PDCD4-202ENST00000393104 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
PDCD4-202ENST00000393104 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 AKAP2Q9Y2D5 859 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 BTAF1O14981 1849 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
PDCD4-202ENST00000393104 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 SYKP43405 635 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 HOMER1Q86YM7 354 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 MSL3Q8N5Y2 521 aaKnown RBP13.11□□□□□ -0.31
PDCD4-202ENST00000393104 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 UBN2Q6ZU65 1347 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 RIC1Q4ADV7 1423 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 A0A087WZG4 1122 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 DPYDQ12882 1025 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
PDCD4-202ENST00000393104 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 EXOC5O00471 708 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 FBXO2Q9UK22 296 aaPredicted RBP13.1□□□□□ -0.31
PDCD4-202ENST00000393104 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
PDCD4-202ENST00000393104 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 TAF1LQ8IZX4 1826 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 CCDC151A5D8V7 595 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 RXRAP19793 462 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 AMPD2Q01433 879 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 PHKBQ93100 1093 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 A0A1B0GUL7 405 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 WNT7AO00755 349 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
PDCD4-202ENST00000393104 GNG11P61952 73 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 KRT40Q6A162 431 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 TRMT44Q8IYL2 757 aaKnown RBP13.1□□□□□ -0.31
PDCD4-202ENST00000393104 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 MAP3K15Q6ZN16 1313 aa13.1□□□□□ -0.31
PDCD4-202ENST00000393104 LRRIQ3A6PVS8 624 aaPredicted RBP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 ONECUT3O60422 494 aaPredicted RBP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 TMOD3Q9NYL9 352 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 CUL4BQ13620 913 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 KARSQ15046 597 aaKnown RBP13.09□□□□□ -0.31
PDCD4-202ENST00000393104 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
PDCD4-202ENST00000393104 ZMYM6O95789 1325 aa13.08□□□□□ -0.31
PDCD4-202ENST00000393104 RGL2O15211 777 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 VSNL1P62760 191 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 REXO2Q9Y3B8 237 aaKnown RBP13.08□□□□□ -0.32
PDCD4-202ENST00000393104 NID2Q14112 1375 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
PDCD4-202ENST00000393104 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
PDCD4-202ENST00000393104 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 NOA1Q8NC60 698 aaKnown RBP13.08□□□□□ -0.32
PDCD4-202ENST00000393104 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 KCNH3Q9ULD8 1083 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 CDKAL1Q5VV42 579 aa13.08□□□□□ -0.32
PDCD4-202ENST00000393104 MYH2Q9UKX2 1941 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 SERPINC1P01008 464 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 CASQ1P31415 396 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 ERVK-24P63145 666 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 LRRC31Q6UY01 552 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 SRGAP1Q7Z6B7 1085 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 ENOX1Q8TC92 643 aaKnown RBP13.07□□□□□ -0.32
PDCD4-202ENST00000393104 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 NUP98P52948 1817 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 DHX16O60231 1041 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms