RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
CCDC57-203ENST00000392343 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
CCDC57-203ENST00000392343 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 TXLNAP40222 546 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 TXLNBQ8N3L3 684 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCDC57-203ENST00000392343 RABGGTAQ92696 567 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 LY9Q9HBG7 655 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 PDE11AQ9HCR9 933 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 ZSWIM5Q9P217 1185 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 WWC3Q9ULE0 1092 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 SLC12A7Q9Y666 1083 aa15.97■□□□□ 0.15
CCDC57-203ENST00000392343 ZNF532Q9HCE3 1301 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 ADD2P35612 726 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 CHMP4BP1P59074 171 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 ZNF569Q5MCW4 686 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 OXER1Q8TDS5 423 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 STAMQ92783 540 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 FEZ2Q9UHY8 353 aaPredicted RBP15.96■□□□□ 0.15
CCDC57-203ENST00000392343 TACC3Q9Y6A5 838 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 SLIT3O75094 1523 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
CCDC57-203ENST00000392343 C4AP0C0L4 1744 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 C4BP0C0L5 1744 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 FAM237AA0A1B0GTK4 181 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 TRIM66O15016 1216 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.14
CCDC57-203ENST00000392343 PNKPQ96T60 521 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 VPS18Q9P253 973 aa15.96■□□□□ 0.14
CCDC57-203ENST00000392343 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
CCDC57-203ENST00000392343 CCDC175P0C221 793 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 GPTP24298 496 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 GPS2Q13227 327 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 NR1I3Q14994 352 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 LDHAL6AQ6ZMR3 332 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
CCDC57-203ENST00000392343 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.95■□□□□ 0.146e-7■■■□□ 14.9
CCDC57-203ENST00000392343 FBXO2Q9UK22 296 aaPredicted RBP15.95■□□□□ 0.14
CCDC57-203ENST00000392343 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 GOLGA6L9A6NEM1 432 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 SNAP23O00161 211 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 ATP8B1O43520 1251 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 PHACTR2O75167 634 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 C10orf67Q8IYJ2 551 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 IGSF22Q8N9C0 903 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 ENOX1Q8TC92 643 aaKnown RBP15.95■□□□□ 0.14
CCDC57-203ENST00000392343 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
CCDC57-203ENST00000392343 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 MORC3Q14149 939 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 NUTM2AQ8IVF1 878 aaPredicted RBP15.94■□□□□ 0.14
CCDC57-203ENST00000392343 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
CCDC57-203ENST00000392343 CSRNP2Q9H175 543 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 CABP5Q9NP86 173 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 HOOK1Q9UJC3 728 aaKnown RBP15.94■□□□□ 0.14
CCDC57-203ENST00000392343 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
CCDC57-203ENST00000392343 MLKLQ8NB16 471 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 ACRBPQ8NEB7 543 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 NUP133Q8WUM0 1156 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 EPSTI1Q96J88 318 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 ADGRG1Q9Y653 693 aa15.94■□□□□ 0.14
CCDC57-203ENST00000392343 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 AIDAQ96BJ3 306 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 CNNM1Q9NRU3 951 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 MMP1P03956 469 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 PTPREP23469 700 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 CASP14P31944 242 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 CCT6AP40227 531 aaKnown RBP15.93■□□□□ 0.14
CCDC57-203ENST00000392343 PHKA1P46020 1223 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 SARSP49591 514 aaKnown RBP15.93■□□□□ 0.14
CCDC57-203ENST00000392343 SAFBQ15424 915 aaKnown RBP eCLIP15.93■□□□□ 0.14
CCDC57-203ENST00000392343 SRGAP1Q7Z6B7 1085 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.93■□□□□ 0.144e-7■□□□□ 8.8
CCDC57-203ENST00000392343 A0A087X0B3 334 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 CDC25AP30304 524 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 GREM2Q9H772 168 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 ABCB6Q9NP58 842 aa15.93■□□□□ 0.14
CCDC57-203ENST00000392343 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
CCDC57-203ENST00000392343 MYO5AQ9Y4I1 1855 aaKnown RBP15.92■□□□□ 0.14
CCDC57-203ENST00000392343 PRKAB2O43741 272 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 PDE6AP16499 860 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
CCDC57-203ENST00000392343 SLC35F6Q8N357 371 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 CCDC151A5D8V7 595 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 ACTN4O43707 911 aaKnown RBP15.92■□□□□ 0.14
CCDC57-203ENST00000392343 KIF5CO60282 957 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 ITGA6P23229 1130 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 JAKMIP3Q5VZ66 844 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 ARMT1Q9H993 441 aa15.92■□□□□ 0.14
CCDC57-203ENST00000392343 WDR19Q8NEZ3 1342 aa15.91■□□□□ 0.14
CCDC57-203ENST00000392343 A0A1B0GTH6 734 aa15.91■□□□□ 0.14
CCDC57-203ENST00000392343 FMNL1O95466 1100 aaPredicted RBP15.91■□□□□ 0.14
CCDC57-203ENST00000392343 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
CCDC57-203ENST00000392343 NAPBQ9H115 298 aa15.91■□□□□ 0.14
CCDC57-203ENST00000392343 EPB41L4AQ9HCS5 686 aaPredicted RBP15.91■□□□□ 0.14
CCDC57-203ENST00000392343 MYO1BO43795 1136 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms