RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 KCTD12Q96CX2 325 aaKnown RBP3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 TTC1Q99614 292 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 GRIP2Q9C0E4 1043 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 POLMQ9NP87 494 aaPredicted RBP3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 BRD7Q9NPI1 651 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 CASS4Q9NQ75 786 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 JADE2Q9NQC1 790 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 CHST12Q9NRB3 414 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 USP25Q9UHP3 1055 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 PUF60Q9UHX1 559 aaKnown RBP3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 SALL4Q9UJQ4 1053 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 RCAN3Q9UKA8 241 aa3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 MRPS23Q9Y3D9 190 aaKnown RBP3.16□□□□□ -1.9
RNU6-220P-201ENST00000390919 A0A1B0GTH6 734 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 A0A1W2PNR3 127 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 POTEMA6NI47 508 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RASSF10A6NK89 507 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 FAM177BA6PVY3 158 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 VSTM5A8MXK1 200 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RNF223E7ERA6 249 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 POTEB2H3BUK9 544 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 GPR39O43194 453 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SIAH2O43255 324 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ADCY3O60266 1144 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 MMP20O60882 483 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RFPL1O75677 317 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SNUPNO95149 360 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 NPTXRO95502 500 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 EYA4O95677 639 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ALDH1A1P00352 501 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 F2P00734 622 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 MYL3P08590 195 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZSCAN20P17040 1043 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ATP4AP20648 1035 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 NME2P22392 152 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 BDNFP23560 247 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RNF144AP50876 292 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SUMO1P63165 101 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 HNRNPUQ00839 825 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SLC7A5Q01650 507 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 PLAURQ03405 335 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 CCINQ13939 588 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 STAT4Q14765 748 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 DHCR24Q15392 516 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 MAPRE1Q15691 268 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SPRED3Q2MJR0 410 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RGL3Q3MIN7 710 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 GNPTABQ3T906 1256 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 MINDY4Q4G0A6 757 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 INO80DQ53TQ3 878 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ACBD5Q5T8D3 534 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 CCDC70Q6NSX1 233 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 POTEGQ6S5H5 508 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SULF2Q8IWU5 870 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SCUBE1Q8IWY4 988 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 TAB3Q8N5C8 712 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ANKRD42Q8N9B4 389 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 TEX19Q8NA77 164 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 KDF1Q8NAX2 398 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 DDX54Q8TDD1 881 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 JPH3Q8WXH2 748 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 DDX1Q92499 740 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 PPP1R14AQ96A00 147 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 MARVELD3Q96A59 401 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 RUNDC1Q96C34 613 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 SCLT1Q96NL6 688 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZIC5Q96T25 663 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 AARSD1Q9BTE6 412 aaKnown RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 PAGR1Q9BTK6 254 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 BHLHE41Q9C0J9 482 aaPredicted RBP3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZNF576Q9H609 170 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 ENAMQ9NRM1 1142 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 TAGLN3Q9UI15 199 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 TRHDEQ9UKU6 1024 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 KCNH4Q9UQ05 1017 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 LZTS1Q9Y250 596 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 DAAM1Q9Y4D1 1078 aa3.15□□□□□ -1.91
RNU6-220P-201ENST00000390919 PHLDB1Q86UU1 1377 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 MEIS3P2A8K0S8 358 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 METTL12A8MUP2 240 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 UPK3BL1B0FP48 263 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 SPATA31C2B4DYI2 1134 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 UPK3BL2E5RIL1 263 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 PDE2AO00408 941 aaPredicted RBP3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TCERG1O14776 1098 aaKnown RBP3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 OPA1O60313 960 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TCEA3O75764 348 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 FBXO21O94952 628 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 UPP2O95045 317 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 PYGMP11217 842 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TRIM27P14373 513 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TARSP26639 723 aaKnown RBP3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 SOX18P35713 384 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 NEK3P51956 506 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZNF143P52747 638 aaPredicted RBP3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 PTPN5P54829 565 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TCIRG1Q13488 830 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 PTPN21Q16825 1174 aa3.14□□□□□ -1.91
RNU6-220P-201ENST00000390919 TMEM95Q3KNT9 176 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms