RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 SMAP1Q8IYB5 467 aaPredicted RBP16.01■□□□□ 0.15
NEK4-202ENST00000383721 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 COL24A1Q17RW2 1714 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 PDE8AO60658 829 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 CCAR2Q8N163 923 aaKnown RBP16.01■□□□□ 0.15
NEK4-202ENST00000383721 TMEM87BQ96K49 555 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
NEK4-202ENST00000383721 TRMT1Q9NXH9 659 aaKnown RBP16.01■□□□□ 0.15
NEK4-202ENST00000383721 IMPACTQ9P2X3 320 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 MYH7P12883 1935 aa16.01■□□□□ 0.15
NEK4-202ENST00000383721 ZBTB43O43298 467 aa16■□□□□ 0.15
NEK4-202ENST00000383721 NAA30Q147X3 362 aaPredicted RBP16■□□□□ 0.15
NEK4-202ENST00000383721 PTPN14Q15678 1187 aa16■□□□□ 0.15
NEK4-202ENST00000383721 SHC4Q6S5L8 630 aa16■□□□□ 0.15
NEK4-202ENST00000383721 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
NEK4-202ENST00000383721 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
NEK4-202ENST00000383721 LY9Q9HBG7 655 aa16■□□□□ 0.15
NEK4-202ENST00000383721 KCND1Q9NSA2 647 aa16■□□□□ 0.15
NEK4-202ENST00000383721 TAOK2Q9UL54 1235 aa16■□□□□ 0.15
NEK4-202ENST00000383721 HPSEQ9Y251 543 aa16■□□□□ 0.15
NEK4-202ENST00000383721 RANBP6O60518 1105 aaKnown RBP16■□□□□ 0.15
NEK4-202ENST00000383721 SMC2O95347 1197 aa16■□□□□ 0.15
NEK4-202ENST00000383721 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
NEK4-202ENST00000383721 FGFR2P21802 821 aa16■□□□□ 0.15
NEK4-202ENST00000383721 SYKP43405 635 aa16■□□□□ 0.15
NEK4-202ENST00000383721 TIGD1Q96MW7 591 aa16■□□□□ 0.15
NEK4-202ENST00000383721 MAP3K14Q99558 947 aa16■□□□□ 0.15
NEK4-202ENST00000383721 MYL10Q9BUA6 226 aa16■□□□□ 0.15
NEK4-202ENST00000383721 EPB41L4AQ9HCS5 686 aaPredicted RBP16■□□□□ 0.15
NEK4-202ENST00000383721 PPP6R2O75170 966 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 CBX1P83916 185 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
NEK4-202ENST00000383721 ALX1Q15699 326 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 ISM2Q6H9L7 571 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 PRR5LQ6MZQ0 368 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 CPLX2Q6PUV4 134 aaKnown RBP15.99■□□□□ 0.15
NEK4-202ENST00000383721 SGMS1Q86VZ5 419 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 AIDAQ96BJ3 306 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 UBE2Q2LH0YL09 131 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
NEK4-202ENST00000383721 ARMCX5Q6P1M9 558 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 LPIN2Q92539 896 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 TACC3Q9Y6A5 838 aa15.99■□□□□ 0.15
NEK4-202ENST00000383721 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 NPHP1O15259 732 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.15
NEK4-202ENST00000383721 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
NEK4-202ENST00000383721 TMEM67Q5HYA8 995 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 HSD3B7Q9H2F3 369 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 PARP3Q9Y6F1 533 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 FAM237AA0A1B0GTK4 181 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
NEK4-202ENST00000383721 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 IFNL3Q8IZI9 196 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
NEK4-202ENST00000383721 SNAP23O00161 211 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 IKBKBO14920 756 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 LIFRP42702 1097 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 GNL2Q13823 731 aaKnown RBP15.97■□□□□ 0.15
NEK4-202ENST00000383721 SPATA5Q8NB90 893 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
NEK4-202ENST00000383721 MBD4O95243 580 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
NEK4-202ENST00000383721 TPM4P67936 248 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 RASGRF1Q13972 1273 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 RESP18Q5W5W9 173 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 E4F1Q66K89 784 aaPredicted RBP15.97■□□□□ 0.15
NEK4-202ENST00000383721 MAGEB6Q8N7X4 407 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 MROH5Q6ZUA9 1318 aa15.97■□□□□ 0.15
NEK4-202ENST00000383721 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 ATP1A3P13637 1013 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 CCDC150Q8NCX0 1101 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 NAPBQ9H115 298 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.96■□□□□ 0.15
NEK4-202ENST00000383721 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
NEK4-202ENST00000383721 IFIT3O14879 490 aaKnown RBP15.96■□□□□ 0.15
NEK4-202ENST00000383721 FANCCQ00597 558 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 PNOCQ13519 176 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 TRIM29Q14134 588 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 SLC26A6Q9BXS9 759 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 SLC12A7Q9Y666 1083 aa15.96■□□□□ 0.15
NEK4-202ENST00000383721 SGIP1Q9BQI5 828 aa15.95■□□□□ 0.14
NEK4-202ENST00000383721 LRP5O75197 1615 aa15.95■□□□□ 0.14
NEK4-202ENST00000383721 GSG1L2A8MUP6 293 aa15.95■□□□□ 0.14
NEK4-202ENST00000383721 SFPQP23246 707 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEK4-202ENST00000383721 PTGER2P43116 358 aa15.95■□□□□ 0.14
NEK4-202ENST00000383721 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms