RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 M0R2C6 588 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 NPM3O75607 178 aaKnown RBP19.47■□□□□ 0.71
SNRPB-201ENST00000381342 ALDH1A1P00352 501 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 USP5P45974 858 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 MAP3K9P80192 1104 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 OTUD7BQ6GQQ9 843 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 WNK4Q96J92 1243 aa19.47■□□□□ 0.71
SNRPB-201ENST00000381342 CRNKL1Q9BZJ0 848 aaKnown RBP19.47■□□□□ 0.71
SNRPB-201ENST00000381342 CLMNQ96JQ2 1002 aa19.46■□□□□ 0.71
SNRPB-201ENST00000381342 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
SNRPB-201ENST00000381342 SAP30BPQ9UHR5 308 aaKnown RBP19.46■□□□□ 0.71
SNRPB-201ENST00000381342 SLC4A8Q2Y0W8 1093 aa19.45■□□□□ 0.7
SNRPB-201ENST00000381342 ZMYM1Q5SVZ6 1142 aa19.45■□□□□ 0.7
SNRPB-201ENST00000381342 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
SNRPB-201ENST00000381342 ELP3Q9H9T3 547 aa19.45■□□□□ 0.7
SNRPB-201ENST00000381342 ATAD5Q96QE3 1844 aa19.45■□□□□ 0.7
SNRPB-201ENST00000381342 DOCK1Q14185 1865 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 PRKAB2O43741 272 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 SLURP2P0DP57 97 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 SDSP20132 328 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 MIGA2Q7L4E1 593 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 ZNF341Q9BYN7 854 aa19.44■□□□□ 0.7
SNRPB-201ENST00000381342 A0A0D9SFI3 127 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 GPAA1O43292 621 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 TBC1D8O95759 1140 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 DGKZQ13574 1117 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 CCDC129Q6ZRS4 1044 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 FAM227BQ96M60 508 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 WRNIP1Q96S55 665 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 PALD1Q9ULE6 856 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 MYH8P13535 1937 aa19.43■□□□□ 0.7
SNRPB-201ENST00000381342 FAM196BA6NMK8 535 aa19.42■□□□□ 0.7
SNRPB-201ENST00000381342 NMIQ13287 307 aaPredicted RBP19.42■□□□□ 0.7
SNRPB-201ENST00000381342 STRBPQ96SI9 672 aaKnown RBP19.42■□□□□ 0.7
SNRPB-201ENST00000381342 CASP8AP2Q9UKL3 1982 aa19.41■□□□□ 0.7
SNRPB-201ENST00000381342 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.41■□□□□ 0.7
SNRPB-201ENST00000381342 IFNL1Q8IU54 200 aa19.41■□□□□ 0.7
SNRPB-201ENST00000381342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.71e-16■■■□□ 15.9
SNRPB-201ENST00000381342 ABHD8Q96I13 439 aa19.41■□□□□ 0.7
SNRPB-201ENST00000381342 DCP1AQ9NPI6 582 aaPredicted RBP19.41■□□□□ 0.7
SNRPB-201ENST00000381342 GTF2A2P52657 109 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 VGLL4Q14135 290 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 MCOLN1Q9GZU1 580 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 DHX36Q9H2U1 1008 aaKnown RBP19.4■□□□□ 0.7
SNRPB-201ENST00000381342 DIAPH3Q9NSV4 1193 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 MCM9Q9NXL9 1143 aa19.4■□□□□ 0.7
SNRPB-201ENST00000381342 EVX2Q03828 476 aa19.39■□□□□ 0.69
SNRPB-201ENST00000381342 TICAM2Q86XR7 235 aa19.39■□□□□ 0.69
SNRPB-201ENST00000381342 OTUD5Q96G74 571 aa19.39■□□□□ 0.69
SNRPB-201ENST00000381342 EPB41L4AQ9HCS5 686 aaPredicted RBP19.39■□□□□ 0.69
SNRPB-201ENST00000381342 HELLSQ9NRZ9 838 aa19.39■□□□□ 0.69
SNRPB-201ENST00000381342 ATP8A2Q9NTI2 1148 aa19.39■□□□□ 0.69
SNRPB-201ENST00000381342 GSG1L2A8MUP6 293 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 GPR25O00155 361 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 CYP2D6P10635 497 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 INPP5BP32019 993 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 ZNF589Q86UQ0 364 aaPredicted RBP19.38■□□□□ 0.69
SNRPB-201ENST00000381342 DNAJC18Q9H819 358 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.38■□□□□ 0.69
SNRPB-201ENST00000381342 PI4KBQ9UBF8 816 aa19.38■□□□□ 0.69
SNRPB-201ENST00000381342 CCDC85CA6NKD9 419 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 HIP1O00291 1037 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 FKTNO75072 461 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 POLR3DP05423 398 aaPredicted RBP19.37■□□□□ 0.69
SNRPB-201ENST00000381342 GNAT2P19087 354 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 GJA5P36382 358 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 MCMDC2Q4G0Z9 681 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
SNRPB-201ENST00000381342 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
SNRPB-201ENST00000381342 CTU1Q7Z7A3 348 aaKnown RBP19.37■□□□□ 0.69
SNRPB-201ENST00000381342 ZKSCAN4Q969J2 545 aaPredicted RBP19.37■□□□□ 0.69
SNRPB-201ENST00000381342 CFHR5Q9BXR6 569 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 LAMA4Q16363 1823 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 PHIPQ8WWQ0 1821 aa19.37■□□□□ 0.69
SNRPB-201ENST00000381342 CCDC171Q6TFL3 1326 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 CCL15-CCL14A0A0B4J2E2 113 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 FOXP2O15409 715 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 PLCD1P51178 756 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 MAP3K10Q02779 954 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 CCL15Q16663 113 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
SNRPB-201ENST00000381342 ZNF296Q8WUU4 475 aaPredicted RBP19.36■□□□□ 0.69
SNRPB-201ENST00000381342 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 HERC5Q9UII4 1024 aaKnown RBP19.36■□□□□ 0.69
SNRPB-201ENST00000381342 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
SNRPB-201ENST00000381342 TESPA1A2RU30 521 aaPredicted RBP19.35■□□□□ 0.69
SNRPB-201ENST00000381342 PHF20L1A8MW92 1017 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 SMIM22K7EJ46 135 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 TBC1D12O60347 775 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 APPP05067 770 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 CETPP11597 493 aa19.35■□□□□ 0.69
SNRPB-201ENST00000381342 TDO2P48775 406 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms