RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 MRPS27Q92552 414 aaKnown RBP29.01■■■□□ 2.23
NDEL1-202ENST00000380025 ZSCAN10Q96SZ4 725 aaPredicted RBP29.01■■■□□ 2.23
NDEL1-202ENST00000380025 ATP8A2Q9NTI2 1148 aa29.01■■■□□ 2.23
NDEL1-202ENST00000380025 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.01■■■□□ 2.23
NDEL1-202ENST00000380025 GUCY1A2P33402 732 aa29■■■□□ 2.23
NDEL1-202ENST00000380025 EVX2Q03828 476 aa29■■■□□ 2.23
NDEL1-202ENST00000380025 TRIM29Q14134 588 aa29■■■□□ 2.23
NDEL1-202ENST00000380025 DZIP1Q86YF9 867 aaKnown RBP29■■■□□ 2.23
NDEL1-202ENST00000380025 FANCBQ8NB91 859 aa29■■■□□ 2.23
NDEL1-202ENST00000380025 PRDM1O75626 825 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 U2AF2P26368 475 aaKnown RBP eCLIP28.99■■■□□ 2.237e-10■■□□□ 13.7
NDEL1-202ENST00000380025 SF3A1Q15459 793 aaKnown RBP28.99■■■□□ 2.23
NDEL1-202ENST00000380025 SASS6Q6UVJ0 657 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 C15orf52Q6ZUT6 534 aaKnown RBP28.99■■■□□ 2.23
NDEL1-202ENST00000380025 WASF1Q92558 559 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 TAOK2Q9UL54 1235 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.99■■■□□ 2.23
NDEL1-202ENST00000380025 CCDC196A0A1B0GTZ2 297 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 CTAGE5O15320 804 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 GPSM2P81274 684 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 WDR66Q8TBY9 1149 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 NUP133Q8WUM0 1156 aa28.99■■■□□ 2.23
NDEL1-202ENST00000380025 GPR101Q96P66 508 aaPredicted RBP28.99■■■□□ 2.23
NDEL1-202ENST00000380025 AP5Z1O43299 807 aa28.98■■■□□ 2.23
NDEL1-202ENST00000380025 KINO60870 393 aaKnown RBP28.98■■■□□ 2.23
NDEL1-202ENST00000380025 FMR1NBQ8N0W7 255 aaPredicted RBP28.98■■■□□ 2.23
NDEL1-202ENST00000380025 CRACR2BQ8N4Y2 399 aaPredicted RBP28.98■■■□□ 2.23
NDEL1-202ENST00000380025 MSNP26038 577 aaKnown RBP28.98■■■□□ 2.23
NDEL1-202ENST00000380025 ZNF804AQ7Z570 1209 aa28.98■■■□□ 2.23
NDEL1-202ENST00000380025 TRIM22Q8IYM9 498 aa28.98■■■□□ 2.23
NDEL1-202ENST00000380025 DDR1Q08345 913 aa28.97■■■□□ 2.23
NDEL1-202ENST00000380025 CMTR1Q8N1G2 835 aaKnown RBP28.97■■■□□ 2.23
NDEL1-202ENST00000380025 CBX8Q9HC52 389 aa28.97■■■□□ 2.23
NDEL1-202ENST00000380025 GNL2Q13823 731 aaKnown RBP28.96■■■□□ 2.23
NDEL1-202ENST00000380025 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.96■■■□□ 2.23
NDEL1-202ENST00000380025 ORC4O43929 436 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 IGSF3O75054 1194 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 LDHBP07195 334 aaKnown RBP28.96■■■□□ 2.23
NDEL1-202ENST00000380025 SLC39A14Q15043 492 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 SBK1Q52WX2 424 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 LUZP1Q86V48 1076 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 RBM17Q96I25 401 aaKnown RBP28.96■■■□□ 2.23
NDEL1-202ENST00000380025 ARPP21Q9UBL0 812 aaPredicted RBP28.96■■■□□ 2.23
NDEL1-202ENST00000380025 ZKSCAN5Q9Y2L8 839 aa28.96■■■□□ 2.23
NDEL1-202ENST00000380025 A0A1B0GVL5 298 aa28.95■■■□□ 2.23
NDEL1-202ENST00000380025 IQCA1Q86XH1 822 aa28.95■■■□□ 2.23
NDEL1-202ENST00000380025 PROM2Q8N271 834 aa28.95■■■□□ 2.23
NDEL1-202ENST00000380025 MYH6P13533 1939 aa28.95■■■□□ 2.22
NDEL1-202ENST00000380025 DEXIO95424 95 aa28.95■■■□□ 2.22
NDEL1-202ENST00000380025 CYP2D6P10635 497 aa28.95■■■□□ 2.22
NDEL1-202ENST00000380025 NDUFA8P51970 172 aa28.95■■■□□ 2.22
NDEL1-202ENST00000380025 AXDND1Q5T1B0 1012 aaPredicted RBP28.95■■■□□ 2.22
NDEL1-202ENST00000380025 CCDC82Q8N4S0 544 aa28.95■■■□□ 2.22
NDEL1-202ENST00000380025 POLRMTO00411 1230 aaKnown RBP28.94■■■□□ 2.22
NDEL1-202ENST00000380025 MMP1P03956 469 aa28.94■■■□□ 2.22
NDEL1-202ENST00000380025 PTMAP06454 111 aaKnown RBP28.94■■■□□ 2.22
NDEL1-202ENST00000380025 PPP2R5BQ15173 497 aa28.94■■■□□ 2.22
NDEL1-202ENST00000380025 IFIT1BQ5T764 474 aaKnown RBP28.94■■■□□ 2.22
NDEL1-202ENST00000380025 GRIK5Q16478 980 aa28.94■■■□□ 2.22
NDEL1-202ENST00000380025 TXNRD1Q16881 649 aa28.94■■■□□ 2.22
NDEL1-202ENST00000380025 DNAJC25Q9H1X3 360 aa28.94■■■□□ 2.22
NDEL1-202ENST00000380025 UFL1O94874 794 aa28.93■■■□□ 2.22
NDEL1-202ENST00000380025 MAP3K14Q99558 947 aa28.93■■■□□ 2.22
NDEL1-202ENST00000380025 PLCB2Q00722 1185 aa28.92■■■□□ 2.22
NDEL1-202ENST00000380025 PTPAQ15257 358 aa28.92■■■□□ 2.22
NDEL1-202ENST00000380025 WDHD1O75717 1129 aaPredicted RBP28.92■■■□□ 2.22
NDEL1-202ENST00000380025 ATP2B4P23634 1241 aa28.92■■■□□ 2.22
NDEL1-202ENST00000380025 HOXA10P31260 410 aaPredicted RBP28.92■■■□□ 2.22
NDEL1-202ENST00000380025 MKRN1Q9UHC7 482 aaKnown RBP28.92■■■□□ 2.22
NDEL1-202ENST00000380025 CATIPQ7Z7H3 387 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 RNF26Q9BY78 433 aaPredicted RBP28.91■■■□□ 2.22
NDEL1-202ENST00000380025 KCNJ14Q9UNX9 436 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 BBOX1O75936 387 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 SLC3A2P08195 630 aaKnown RBP28.91■■■□□ 2.22
NDEL1-202ENST00000380025 ZNF165P49910 485 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 TROAPQ12815 778 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 NOSTRINQ8IVI9 506 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 CD209Q9NNX6 404 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 GGA1Q9UJY5 639 aa28.91■■■□□ 2.22
NDEL1-202ENST00000380025 BTBD18B2RXH4 712 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 PPP6R2O75170 966 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 CAVIN2O95810 425 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 MARCKSP29966 332 aaPredicted RBP28.9■■■□□ 2.22
NDEL1-202ENST00000380025 DIXDC1Q155Q3 683 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 DIS3L2Q8IYB7 885 aaKnown RBP28.9■■■□□ 2.22
NDEL1-202ENST00000380025 MCM9Q9NXL9 1143 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 MROH7-TTC4A0A0A0MT08 1334 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 LRRC37AA6NMS7 1700 aa28.9■■■□□ 2.22
NDEL1-202ENST00000380025 KLRG2A4D1S0 409 aaPredicted RBP28.89■■■□□ 2.22
NDEL1-202ENST00000380025 USP17L8P0C7I0 530 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 CMA1P23946 247 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 GSTO1P78417 241 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 FUT2Q10981 343 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 SH3RF3Q8TEJ3 882 aaPredicted RBP28.89■■■□□ 2.22
NDEL1-202ENST00000380025 LTBP1Q14766 1721 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 SAFBQ15424 915 aaKnown RBP eCLIP28.89■■■□□ 2.22
NDEL1-202ENST00000380025 STX1AQ16623 288 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 PODXL2Q9NZ53 605 aa28.89■■■□□ 2.22
NDEL1-202ENST00000380025 IL1R1P14778 569 aa28.88■■■□□ 2.21
NDEL1-202ENST00000380025 FAM47AQ5JRC9 791 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms