RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 NAV1Q8NEY1 1877 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 ELP1O95163 1332 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 FZD9O00144 591 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 HAX1O00165 279 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 ECE2O60344 883 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 UBE2HP62256 183 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 RBM43Q6ZSC3 357 aaKnown RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 ZNF589Q86UQ0 364 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 TSC1Q92574 1164 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 TSPY26PQ9H489 355 aa9.11□□□□□ -0.95
CDKL5-202ENST00000379996 SH2B1Q9NRF2 756 aaPredicted RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 RBM8AQ9Y5S9 174 aaKnown RBP9.11□□□□□ -0.95
CDKL5-202ENST00000379996 WDR90Q96KV7 1748 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
CDKL5-202ENST00000379996 GSTO1P78417 241 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 NSUN4Q96CB9 384 aaKnown RBP9.1□□□□□ -0.95
CDKL5-202ENST00000379996 FSD1Q9BTV5 496 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 ZNRF3Q9ULT6 936 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 CCDC183Q5T5S1 534 aa9.1□□□□□ -0.95
CDKL5-202ENST00000379996 NOL8Q76FK4 1167 aaKnown RBP9.1□□□□□ -0.95
CDKL5-202ENST00000379996 TRIM44Q96DX7 344 aaPredicted RBP9.1□□□□□ -0.95
CDKL5-202ENST00000379996 DNAJC2Q99543 621 aaKnown RBP9.1□□□□□ -0.95
CDKL5-202ENST00000379996 USP17L3A6NCW0 530 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 USP17L4A6NCW7 530 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 SPDYE16A6NNV3 312 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 TPM2P07951 284 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 GJB2P29033 226 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 ABL2P42684 1182 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PPP4CP60510 307 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 AOC3Q16853 763 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 USP17L1Q7RTZ2 530 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 ZSCAN31Q96LW9 406 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 ADAMTSL1Q8N6G6 1762 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 YDJCA8MPS7 323 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PPIP5K2O43314 1243 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 RAD21O60216 631 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PDE6AP16499 860 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 RPS12P25398 132 aaKnown RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PI16Q6UXB8 463 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 SLF2Q8IX21 1173 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 GMLQ99445 158 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PDRG1Q9NUG6 133 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 UBE2Q2Q8WVN8 375 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 CCDC97Q96F63 343 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-202ENST00000379996 DSCC1Q9BVC3 393 aa9.09□□□□□ -0.95
CDKL5-202ENST00000379996 SCN4AP35499 1836 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 GNAT2P19087 354 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 RPS6KB1P23443 525 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 NT5C2P49902 561 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 GIMAP6Q6P9H5 292 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 JAKMIP1Q96N16 626 aaKnown RBP9.08□□□□□ -0.96
CDKL5-202ENST00000379996 DIAPH3Q9NSV4 1193 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 BCS1LQ9Y276 419 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 GRIN3BO60391 1043 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 LMNB1P20700 586 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 PRELPP51888 382 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 ALX1Q15699 326 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 NIM1KQ8IY84 436 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 FAM184AQ8NB25 1140 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 EDC3Q96F86 508 aaKnown RBP9.08□□□□□ -0.96
CDKL5-202ENST00000379996 GPR101Q96P66 508 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-202ENST00000379996 AGXT2Q9BYV1 514 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 SERPINA10Q9UK55 444 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 MROH7-TTC4A0A0A0MT08 1334 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 POM121CA8CG34 1229 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
CDKL5-202ENST00000379996 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
CDKL5-202ENST00000379996 CCDC83Q8IWF9 413 aa9.08□□□□□ -0.96
CDKL5-202ENST00000379996 GPR75-ASB3A0A0A6YYF3 556 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 LDHBP07195 334 aaKnown RBP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 MECOMQ03112 1051 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 RIOK1Q9BRS2 568 aaKnown RBP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 CCDC39Q9UFE4 941 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 WWC3Q9ULE0 1092 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 ZNF532Q9HCE3 1301 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 LDHCP07864 332 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 DNM1Q05193 864 aaKnown RBP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 TNIP1Q15025 636 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 SLC9C2Q5TAH2 1124 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 TTLL5Q6EMB2 1281 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 KIAA1211Q6ZU35 1233 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 CDC37L1Q7L3B6 337 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 CERS5Q8N5B7 392 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 KHSRPQ92945 711 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 ZNF277Q9NRM2 450 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-202ENST00000379996 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 CYP46A1Q9Y6A2 500 aa9.07□□□□□ -0.96
CDKL5-202ENST00000379996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms