RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GJB2P29033 226 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 AARSP49588 968 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 CHMP4BP1P59074 171 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 KIAA1328Q86T90 577 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 TMTC2Q8N394 836 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SLX1AQ9BQ83 275 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 MIS18AQ9NYP9 233 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SHANK3Q9BYB0 1731 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 VPS37CA5D8V6 355 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 H7C1W4 665 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 ZEB2O60315 1214 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 VSNL1P62760 191 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 LAMB3Q13751 1172 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 STX1AQ16623 288 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SPATA21Q7Z572 469 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 MYLK4Q86YV6 388 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 CENPHQ9H3R5 247 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SLC39A2Q9NP94 309 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 ANO2Q9NQ90 1003 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 GLI3P10071 1580 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 ADCY9O60503 1353 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SHTN1A0MZ66 631 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 NRDCO43847 1150 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 GNG11P61952 73 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 CCDC40Q4G0X9 1142 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 G2E3Q7L622 706 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 RBM12BQ8IXT5 1001 aaKnown RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 LRRC59Q96AG4 307 aaKnown RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 TSPAN18Q96SJ8 248 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 XPO4Q9C0E2 1151 aaKnown RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 WDHD1O75717 1129 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 LARGE1O95461 756 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 OATP04181 439 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 CSB-PGBD3P0DP91 1061 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 PDE1AP54750 535 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 E2F5Q15329 346 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 RUFY3Q7L099 469 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 SRGAP1Q7Z6B7 1085 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 AOPEPQ8N6M6 819 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 TTC14Q96N46 770 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 ZNF396Q96N95 335 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 RMI1Q9H9A7 625 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 LGR6Q9HBX8 967 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 TPCN1Q9ULQ1 816 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 MYO6Q9UM54 1294 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 GOLGA6L4A6NEF3 574 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 IL2RBP14784 551 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 AK2P54819 239 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 SNCBQ16143 134 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 FILIP1LQ4L180 1135 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 B4GALNT2Q8NHY0 566 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 MAGEC3Q8TD91 643 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 TCP11Q8WWU5 503 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 RIN2Q8WYP3 895 aaPredicted RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 TSGA10Q9BZW7 698 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 NAT10Q9H0A0 1025 aaKnown RBP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 SLC40A1Q9NP59 571 aa8.48□□□□□ -1.05
CDKL5-201ENST00000379989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDKL5-201ENST00000379989 SPEF2Q9C093 1822 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 ARFGEF2Q9Y6D5 1785 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 EIF3HO15372 352 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKL5-201ENST00000379989 CUTAO60888 179 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 KIAA0754O94854 1291 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 POLD1P28340 1107 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 RANBP1P43487 201 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 KRT24Q2M2I5 525 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 FERMT3Q86UX7 667 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 ZCRB1Q8TBF4 217 aaKnown RBP8.47□□□□□ -1.05
CDKL5-201ENST00000379989 RUFY2Q8WXA3 655 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 PGBD1Q96JS3 809 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 EPAS1Q99814 870 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 BATF3Q9NR55 127 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 ZC3H4Q9UPT8 1303 aaKnown RBP8.47□□□□□ -1.05
CDKL5-201ENST00000379989 NUP188Q5SRE5 1749 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 SPDYE3A6NKU9 549 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 APBB1O00213 710 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 ZNF202O95125 648 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 HSPA2P54652 639 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 CCDC181Q5TID7 509 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 CAPRIN2Q6IMN6 1127 aaKnown RBP8.47□□□□□ -1.05
CDKL5-201ENST00000379989 MIS18BP1Q6P0N0 1132 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 CHPF2Q9P2E5 772 aa8.47□□□□□ -1.05
CDKL5-201ENST00000379989 GLRX3O76003 335 aaKnown RBP8.46□□□□□ -1.05
CDKL5-201ENST00000379989 FESP07332 822 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.05
CDKL5-201ENST00000379989 MPRIPQ6WCQ1 1025 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 SPATA32Q96LK8 384 aa8.46□□□□□ -1.05
CDKL5-201ENST00000379989 METTL22Q9BUU2 404 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms