RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 CDK11BP21127 795 aaKnown RBP18.02■□□□□ 0.48
BRF1-203ENST00000379937 GTF2IP78347 998 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 LONRF3Q496Y0 759 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 PIK3AP1Q6ZUJ8 805 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 ZFP91Q96JP5 570 aaPredicted RBP18.02■□□□□ 0.48
BRF1-203ENST00000379937 KCNQ5Q9NR82 932 aa18.02■□□□□ 0.48
BRF1-203ENST00000379937 SERPINC1P01008 464 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 TFAP4Q01664 338 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 UBE3CQ15386 1083 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
BRF1-203ENST00000379937 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
BRF1-203ENST00000379937 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
BRF1-203ENST00000379937 TNS2Q63HR2 1409 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 FGFR2P21802 821 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 TAL1P17542 331 aaPredicted RBP18.01■□□□□ 0.47
BRF1-203ENST00000379937 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 GJA10Q969M2 543 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
BRF1-203ENST00000379937 SNW1Q13573 536 aaKnown RBP18■□□□□ 0.47
BRF1-203ENST00000379937 CFAP100Q494V2 611 aa18■□□□□ 0.47
BRF1-203ENST00000379937 FANCBQ8NB91 859 aa18■□□□□ 0.47
BRF1-203ENST00000379937 CACTINQ8WUQ7 758 aaKnown RBP18■□□□□ 0.47
BRF1-203ENST00000379937 POLD4Q9HCU8 107 aa18■□□□□ 0.47
BRF1-203ENST00000379937 FAM217BQ9NTX9 383 aaPredicted RBP18■□□□□ 0.47
BRF1-203ENST00000379937 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
BRF1-203ENST00000379937 ZSCAN29Q8IWY8 852 aaPredicted RBP18■□□□□ 0.47
BRF1-203ENST00000379937 ENAHQ8N8S7 591 aaPredicted RBP18■□□□□ 0.47
BRF1-203ENST00000379937 AFF2P51816 1311 aa18■□□□□ 0.47
BRF1-203ENST00000379937 PLCD1P51178 756 aa18■□□□□ 0.47
BRF1-203ENST00000379937 SNAP25P60880 206 aa18■□□□□ 0.47
BRF1-203ENST00000379937 FAM160A1Q05DH4 1040 aa18■□□□□ 0.47
BRF1-203ENST00000379937 PARP10Q53GL7 1025 aa18■□□□□ 0.47
BRF1-203ENST00000379937 PDLIM2Q96JY6 352 aa18■□□□□ 0.47
BRF1-203ENST00000379937 DCCP43146 1447 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 NLRP5P59047 1200 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 FRMPD2Q68DX3 1309 aaPredicted RBP17.99■□□□□ 0.47
BRF1-203ENST00000379937 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
BRF1-203ENST00000379937 HEATR3Q7Z4Q2 680 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 MRC1P22897 1456 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 PRR29P0C7W0 189 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 DBNDD1Q9H9R9 158 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
BRF1-203ENST00000379937 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 SHROOM1Q2M3G4 852 aaPredicted RBP17.98■□□□□ 0.47
BRF1-203ENST00000379937 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 ESR2Q92731 530 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 PP2D1A8MPX8 630 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 FUCA2Q9BTY2 467 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 SERTAD1Q9UHV2 236 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 CDHR2Q9BYE9 1310 aa17.98■□□□□ 0.47
BRF1-203ENST00000379937 ARID4AP29374 1257 aaPredicted RBP17.98■□□□□ 0.47
BRF1-203ENST00000379937 CTR9Q6PD62 1173 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 SHC4Q6S5L8 630 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 PLA2G12BQ9BX93 195 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 RCOR1Q9UKL0 485 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 LDHBP07195 334 aaKnown RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 CATIPQ7Z7H3 387 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 CEP57L1Q8IYX8 460 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 LRRC47Q8N1G4 583 aaKnown RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
BRF1-203ENST00000379937 CCAR2Q8N163 923 aaKnown RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
BRF1-203ENST00000379937 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
BRF1-203ENST00000379937 LETM1O95202 739 aaPredicted RBP17.96■□□□□ 0.47
BRF1-203ENST00000379937 DPF2Q92785 391 aa17.96■□□□□ 0.47
BRF1-203ENST00000379937 PCDHA5Q9Y5H7 936 aa17.96■□□□□ 0.47
BRF1-203ENST00000379937 ZMYM6O95789 1325 aa17.96■□□□□ 0.46
BRF1-203ENST00000379937 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 ZNF75DP51815 510 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
BRF1-203ENST00000379937 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.95■□□□□ 0.46
BRF1-203ENST00000379937 ZSWIM4Q9H7M6 989 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 STX1AQ16623 288 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
BRF1-203ENST00000379937 GPCPD1Q9NPB8 672 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 DCP1AQ9NPI6 582 aaPredicted RBP17.95■□□□□ 0.46
BRF1-203ENST00000379937 KCNH3Q9ULD8 1083 aa17.95■□□□□ 0.46
BRF1-203ENST00000379937 ZNF142P52746 1687 aaPredicted RBP17.95■□□□□ 0.46
BRF1-203ENST00000379937 N4BP2Q86UW6 1770 aaPredicted RBP17.95■□□□□ 0.46
BRF1-203ENST00000379937 COL18A1P39060 1754 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 SERPINB2P05120 415 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 SKILP12757 684 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 GPSM2P81274 684 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 RAD51AP2Q09MP3 1159 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
BRF1-203ENST00000379937 NSUN4Q96CB9 384 aaKnown RBP17.94■□□□□ 0.46
BRF1-203ENST00000379937 LLPHQ9BRT6 129 aaKnown RBP17.94■□□□□ 0.46
BRF1-203ENST00000379937 CSRNP2Q9H175 543 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 OFD1O75665 1012 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 SLC16A2P36021 539 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 KRT23Q9C075 422 aa17.94■□□□□ 0.46
BRF1-203ENST00000379937 PDGFDQ9GZP0 370 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms