RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 HSPA2P54652 639 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 MAEAQ7L5Y9 396 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 FAM227BQ96M60 508 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 DDX39AO00148 427 aaKnown RBP21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 SLC1A4P43007 532 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 UTP14CQ5TAP6 766 aaKnown RBP21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 CERS3Q8IU89 383 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 BABAM1Q9NWV8 329 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 STK24Q9Y6E0 443 aa21.21■□□□□ 0.99
TBC1D4-201ENST00000377625 SEC24BO95487 1268 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 NONOQ15233 471 aaKnown RBP eCLIP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 CLUL1Q15846 466 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 GEN1Q17RS7 908 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 LRWD1Q9UFC0 647 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 TTF2Q9UNY4 1162 aaKnown RBP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 RNASE9P60153 205 aaKnown RBP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 DPP8Q6V1X1 898 aaPredicted RBP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 SNX29Q8TEQ0 813 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 CCT6BQ92526 530 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 IVNS1ABPQ9Y6Y0 642 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 CTDSPL2Q05D32 466 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 DAPK3O43293 454 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 ACTN4O43707 911 aaKnown RBP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 C8orf74Q6P047 294 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 ZNF365Q70YC5 407 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 NOX5Q96PH1 765 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 ZNF408Q9H9D4 720 aa21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 EIF2AK4Q9P2K8 1649 aaKnown RBP21.2■□□□□ 0.98
TBC1D4-201ENST00000377625 CEP128Q6ZU80 1094 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 UBL4BQ8N7F7 174 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 LPIN2Q92539 896 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 GMNNO75496 209 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 CRCPO75575 148 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 OTUD7BQ6GQQ9 843 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 KRT25Q7Z3Z0 450 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 HAUS7Q99871 368 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 INTS8Q75QN2 995 aaKnown RBP21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 TRIM6Q9C030 488 aaPredicted RBP21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 RAPGEF6Q8TEU7 1601 aa21.19■□□□□ 0.98
TBC1D4-201ENST00000377625 HOXB7P09629 217 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 CCDC110Q8TBZ0 833 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 MYL10Q9BUA6 226 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 CLSTN2Q9H4D0 955 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 KAT6BQ8WYB5 2073 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 VIMP08670 466 aaKnown RBP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 FANCCQ00597 558 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 HERC4Q5GLZ8 1057 aaPredicted RBP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 MRRFQ96E11 262 aaKnown RBP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 TESK2Q96S53 571 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 ATP10BO94823 1461 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 IRX5P78411 483 aaPredicted RBP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 AOX1Q06278 1338 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 A1BGP04217 495 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 DNM3Q9UQ16 869 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 UTP11Q9Y3A2 253 aaKnown RBP21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 LMTK3Q96Q04 1460 aa21.18■□□□□ 0.98
TBC1D4-201ENST00000377625 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 KBTBD3Q8NAB2 608 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 NUP58Q9BVL2 599 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 HPDP32754 393 aaPredicted RBP21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 USH1GQ495M9 461 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 CPXCR1Q8N123 301 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 MLKLQ8NB16 471 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 ZBED4O75132 1171 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 CDAN1Q8IWY9 1227 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 PODXL2Q9NZ53 605 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 SPATA5Q8NB90 893 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 DYMQ7RTS9 669 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 SUCLG2Q96I99 432 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 SLC52A2Q9HAB3 445 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 CCDC87Q9NVE4 849 aa21.17■□□□□ 0.98
TBC1D4-201ENST00000377625 ZWINTO95229 277 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 SLC9C1Q4G0N8 1177 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 FAM173BQ6P4H8 233 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 AZI2Q9H6S1 392 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 MYCT1Q8N699 235 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 PHKBQ93100 1093 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 STK10O94804 968 aaKnown RBP21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 TBC1D7Q9P0N9 293 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 SBNO1A3KN83 1393 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 H0YIN7 160 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 SECISBP2LQ93073 1101 aaKnown RBP21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 CTTNBP2NLQ9P2B4 639 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 SGSM2O43147 1006 aa21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 NOL3O60936 208 aaKnown RBP21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 GTF2A1P52655 376 aaPredicted RBP21.16■□□□□ 0.98
TBC1D4-201ENST00000377625 CALCRLQ16602 461 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 BEND3Q5T5X7 828 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 LGR6Q9HBX8 967 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 MKRN1Q9UHC7 482 aaKnown RBP21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 HSPA1LP34931 641 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 NSMFQ6X4W1 530 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 LZTS2Q9BRK4 669 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 IBTKQ9P2D0 1353 aaPredicted RBP21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 TCP10Q12799 353 aa21.15■□□□□ 0.98
TBC1D4-201ENST00000377625 PPP2R5BQ15173 497 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms