RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
TNFRSF9-201ENST00000377507 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 SMC2O95347 1197 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 MYL5Q02045 173 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 PPARAQ07869 468 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 PNOCQ13519 176 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 SEC23AQ15436 765 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 E4F1Q66K89 784 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 DIS3L2Q8IYB7 885 aaKnown RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 LRP2BPQ9P2M1 347 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 NIP7Q9Y221 180 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 SPATA31A1Q5TZJ5 1347 aa13.53□□□□□ -0.24
TNFRSF9-201ENST00000377507 ERICH2A1L162 156 aa13.52□□□□□ -0.24
TNFRSF9-201ENST00000377507 TMC6Q7Z403 805 aa13.52□□□□□ -0.24
TNFRSF9-201ENST00000377507 ADGRA1Q86SQ6 560 aa13.52□□□□□ -0.24
TNFRSF9-201ENST00000377507 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.24
TNFRSF9-201ENST00000377507 TUBB4AP04350 444 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 FGRP09769 529 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 SARSP49591 514 aaKnown RBP13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 DDB1Q16531 1140 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 CLEC4GQ6UXB4 293 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 CNNM3Q8NE01 707 aa13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 RIOK1Q9BRS2 568 aaKnown RBP13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.25
TNFRSF9-201ENST00000377507 BMP6P22004 513 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 CYP7A1P22680 504 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 SFPQP23246 707 aaKnown RBP eCLIP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 SF3B3Q15393 1217 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 MIGA1Q8NAN2 632 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 KCNJ14Q9UNX9 436 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 COL4A1P02462 1669 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 CBFA2T2O43439 604 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 RRP12Q5JTH9 1297 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 ESR2Q92731 530 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 TRMT1Q9NXH9 659 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 HOOK1Q9UJC3 728 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
TNFRSF9-201ENST00000377507 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 RGL2O15211 777 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 PCP11498 1178 aaKnown RBP13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 UBASH3AP57075 661 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 FUT2Q10981 343 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 UBAC1Q9BSL1 405 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 BRIP1Q9BX63 1249 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
TNFRSF9-201ENST00000377507 NRAPQ86VF7 1730 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 GRIN1Q05586 938 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 TRIML1Q8N9V2 468 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 SPATA20Q8TB22 786 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 DPF2Q92785 391 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 PPP1R13BQ96KQ4 1090 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 PCDHB6Q9Y5E3 794 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 CACNA1SQ13698 1873 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 COL1A1P02452 1464 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 TNKSO95271 1327 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 NRDCO43847 1150 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 PDE4BQ07343 736 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 NR5A1Q13285 461 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 POSTNQ15063 836 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 PKN1Q16512 942 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 ZNF592Q92610 1267 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 SHISA4Q96DD7 197 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 FEZ1Q99689 392 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 MAN1B1Q9UKM7 699 aa13.49□□□□□ -0.25
TNFRSF9-201ENST00000377507 FOXN1O15353 648 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 MORC3Q14149 939 aa13.48□□□□□ -0.25
TNFRSF9-201ENST00000377507 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms