RNA–Protein interactions for RNA: ENST00000376389.7

FLOT1-201, Transcript of flotillin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FLOT1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-201ENST00000376389 ILDR1Q86SU0 546 aaPredicted RBP26.48■■□□□ 1.83
FLOT1-201ENST00000376389 ZSCAN10Q96SZ4 725 aaPredicted RBP26.48■■□□□ 1.83
FLOT1-201ENST00000376389 DDX49Q9Y6V7 483 aaKnown RBP26.48■■□□□ 1.83
FLOT1-201ENST00000376389 NAV1Q8NEY1 1877 aa26.48■■□□□ 1.83
FLOT1-201ENST00000376389 SCN9AQ15858 1988 aa26.48■■□□□ 1.83
FLOT1-201ENST00000376389 PCP11498 1178 aaKnown RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 PLCG2P16885 1265 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 PLCD1P51178 756 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 DNM1Q05193 864 aaKnown RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 KIAA2012Q0VF49 1180 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 SEC23AQ15436 765 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 SKOR2Q2VWA4 1001 aaPredicted RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 CERS3Q8IU89 383 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 TCHHQ07283 1943 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 FLT1P17948 1338 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 PPIP5K2O43314 1243 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 ORC4O43929 436 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 POLR3DP05423 398 aaPredicted RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 PDIA4P13667 645 aaKnown RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 NCLP19338 710 aaKnown RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 PDE4BQ07343 736 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 FAM217BQ9NTX9 383 aaPredicted RBP26.47■■□□□ 1.83
FLOT1-201ENST00000376389 ATP6V1DQ9Y5K8 247 aa26.47■■□□□ 1.83
FLOT1-201ENST00000376389 ADAMTSL1Q8N6G6 1762 aa26.46■■□□□ 1.83
FLOT1-201ENST00000376389 NMT2O60551 498 aa26.46■■□□□ 1.83
FLOT1-201ENST00000376389 GUCY1B3Q02153 619 aa26.46■■□□□ 1.83
FLOT1-201ENST00000376389 ENAHQ8N8S7 591 aaPredicted RBP26.46■■□□□ 1.83
FLOT1-201ENST00000376389 CCDC93Q567U6 631 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 DACT2Q5SW24 774 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 STRIP1Q5VSL9 837 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 SYNE3Q6ZMZ3 975 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 USP48Q86UV5 1035 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 KIAA0825Q8IV33 1275 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 SUPT20HQ8NEM7 779 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 MTA3Q9BTC8 594 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 MTFR1LQ9H019 292 aa26.45■■□□□ 1.83
FLOT1-201ENST00000376389 ORC3Q9UBD5 711 aaPredicted RBP26.45■■□□□ 1.83
FLOT1-201ENST00000376389 AMOTL1Q8IY63 956 aa26.45■■□□□ 1.82
FLOT1-201ENST00000376389 SLC44A5Q8NCS7 719 aa26.45■■□□□ 1.82
FLOT1-201ENST00000376389 PPP1R1BQ9UD71 204 aaPredicted RBP26.45■■□□□ 1.82
FLOT1-201ENST00000376389 KIF3AQ9Y496 699 aa26.45■■□□□ 1.82
FLOT1-201ENST00000376389 USP17L3A6NCW0 530 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 USP17L4A6NCW7 530 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 POLD1P28340 1107 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 PICALMQ13492 652 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 USP17L1Q7RTZ2 530 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 TMTC2Q8N394 836 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 PHKBQ93100 1093 aa26.44■■□□□ 1.82
FLOT1-201ENST00000376389 IQCA1Q86XH1 822 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 ZNF654Q8IZM8 581 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 GPT2Q8TD30 523 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 NUP133Q8WUM0 1156 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 PCDHAC2Q9Y5I4 1007 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 KIF13BQ9NQT8 1826 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 YDJCA8MPS7 323 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 FIBPO43427 364 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 OTUD7BQ6GQQ9 843 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 TEKT1Q969V4 418 aa26.43■■□□□ 1.82
FLOT1-201ENST00000376389 TSPY2A6NKD2 308 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 GADD45BO75293 160 aaPredicted RBP26.42■■□□□ 1.82
FLOT1-201ENST00000376389 DEKP35659 375 aaKnown RBP26.42■■□□□ 1.82
FLOT1-201ENST00000376389 NTRK3Q16288 839 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 KLHL40Q2TBA0 621 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 IFIT1BQ5T764 474 aaKnown RBP26.42■■□□□ 1.82
FLOT1-201ENST00000376389 RTKN2Q8IZC4 609 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 USP40Q9NVE5 1235 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 TAOK2Q9UL54 1235 aa26.42■■□□□ 1.82
FLOT1-201ENST00000376389 CRKP46108 304 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 RESTQ13127 1097 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 TPRNQ4KMQ1 711 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 MKNK2Q9HBH9 465 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 ZNF277Q9NRM2 450 aaPredicted RBP26.41■■□□□ 1.82
FLOT1-201ENST00000376389 GJB4Q9NTQ9 266 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 ROBO3Q96MS0 1386 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 APOBEC3HQ6NTF7 200 aaKnown RBP26.41■■□□□ 1.82
FLOT1-201ENST00000376389 HHIPL2Q6UWX4 724 aa26.41■■□□□ 1.82
FLOT1-201ENST00000376389 DDX4Q9NQI0 724 aaKnown RBP26.41■■□□□ 1.82
FLOT1-201ENST00000376389 PSDA5PKW4 1024 aaPredicted RBP26.4■■□□□ 1.82
FLOT1-201ENST00000376389 TFAP4Q01664 338 aa26.4■■□□□ 1.82
FLOT1-201ENST00000376389 RTN1Q16799 776 aa26.4■■□□□ 1.82
FLOT1-201ENST00000376389 CMTR1Q8N1G2 835 aaKnown RBP26.4■■□□□ 1.82
FLOT1-201ENST00000376389 KLHL34Q8N239 644 aa26.4■■□□□ 1.82
FLOT1-201ENST00000376389 UPF1Q92900 1129 aaKnown RBP eCLIP26.4■■□□□ 1.825e-7■□□□□ 9.3
FLOT1-201ENST00000376389 AIFM3Q96NN9 605 aa26.4■■□□□ 1.82
FLOT1-201ENST00000376389 PIM2Q9P1W9 311 aa26.4■■□□□ 1.82
FLOT1-201ENST00000376389 ZNF646O15015 1829 aaPredicted RBP26.4■■□□□ 1.82
FLOT1-201ENST00000376389 UBE2Q2LH0YL09 131 aa26.39■■□□□ 1.82
FLOT1-201ENST00000376389 TGFB2P61812 414 aa26.39■■□□□ 1.82
FLOT1-201ENST00000376389 CDC42EP5Q6NZY7 148 aa26.39■■□□□ 1.82
FLOT1-201ENST00000376389 CPLX2Q6PUV4 134 aaKnown RBP26.39■■□□□ 1.82
FLOT1-201ENST00000376389 DDX60LQ5H9U9 1706 aaKnown RBP26.39■■□□□ 1.82
FLOT1-201ENST00000376389 WDHD1O75717 1129 aaPredicted RBP26.39■■□□□ 1.81
FLOT1-201ENST00000376389 CDKL5O76039 1030 aa26.39■■□□□ 1.81
FLOT1-201ENST00000376389 FKBP1AP62942 108 aaKnown RBP26.39■■□□□ 1.81
FLOT1-201ENST00000376389 C8orf76Q96K31 380 aa26.39■■□□□ 1.81
FLOT1-201ENST00000376389 PSMD1Q99460 953 aa26.39■■□□□ 1.81
FLOT1-201ENST00000376389 MYH1P12882 1939 aa26.38■■□□□ 1.81
FLOT1-201ENST00000376389 RBM5P52756 815 aaKnown RBP eCLIP26.38■■□□□ 1.814e-7■□□□□ 8.5
FLOT1-201ENST00000376389 CCDC82Q8N4S0 544 aa26.38■■□□□ 1.81
FLOT1-201ENST00000376389 FANCBQ8NB91 859 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms