RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 FEZ1Q99689 392 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 CCDC196A0A1B0GTZ2 297 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 UFL1O94874 794 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 TNNT3P45378 269 aaPredicted RBP11.51□□□□□ -0.57
ZNF550-203ENST00000376230 SCNN1DP51172 638 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 TFAP4Q01664 338 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 PPARDQ03181 441 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 RAD51AP2Q09MP3 1159 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 TBC1D9BQ66K14 1250 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 UBXN4Q92575 508 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 LZTFL1Q9NQ48 299 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 UBR1Q8IWV7 1749 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 KIF23Q02241 960 aaPredicted RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 FBXO38Q6PIJ6 1188 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 FAM196AQ6ZSG2 479 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 LINC00301Q8NCQ3 95 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 DESI2Q9BSY9 194 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 CRNKL1Q9BZJ0 848 aaKnown RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 FANCLQ9NW38 375 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 CTAGE5O15320 804 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 SLU7O95391 586 aaKnown RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 KMT5BQ4FZB7 885 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 UBA5Q9GZZ9 404 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 KIAA1468Q9P260 1216 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 SOS2Q07890 1332 aaPredicted RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 WDHD1O75717 1129 aaPredicted RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 IL6STP40189 918 aaPredicted RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 PPFIBP1Q86W92 1011 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 LLPHQ9BRT6 129 aaKnown RBP11.5□□□□□ -0.57
ZNF550-203ENST00000376230 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
ZNF550-203ENST00000376230 USP42Q9H9J4 1324 aaKnown RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 TEX35Q5T0J7 233 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 RRAGBQ5VZM2 374 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 FANCBQ8NB91 859 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 ZNF397Q8NF99 534 aaPredicted RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 EPSTI1Q96J88 318 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 USP21Q9UK80 565 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 USP17L3A6NCW0 530 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 USP17L4A6NCW7 530 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 CIAO1O76071 339 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 SOGA3Q5TF21 947 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 USP17L1Q7RTZ2 530 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 WASF1Q92558 559 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 VPS16Q9H269 839 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 FANCCQ00597 558 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 EXOSC10Q01780 885 aaKnown RBP11.49□□□□□ -0.57
ZNF550-203ENST00000376230 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 FKBP15Q5T1M5 1219 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 JAKMIP3Q5VZ66 844 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 UTYO14607 1347 aa11.49□□□□□ -0.57
ZNF550-203ENST00000376230 CCDC66A2RUB6 948 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 GNG11P61952 73 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
ZNF550-203ENST00000376230 CNBD1Q8NA66 436 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TDRD7Q8NHU6 1098 aaKnown RBP11.48□□□□□ -0.57
ZNF550-203ENST00000376230 ANKRD7Q92527 254 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 RCOR1Q9UKL0 485 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 NFE2L3Q9Y4A8 694 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 GSG1L2A8MUP6 293 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TOM1O60784 492 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TPM1P09493 284 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 CACNB3P54284 484 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 PDE4BQ07343 736 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
ZNF550-203ENST00000376230 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
ZNF550-203ENST00000376230 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 LRP10Q7Z4F1 713 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 CLEC10AQ8IUN9 316 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 PIK3C2AO00443 1686 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 MROH5Q6ZUA9 1318 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 SH2B2O14492 632 aaPredicted RBP11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 TXNRD3Q86VQ6 643 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 CNNM2Q9H8M5 875 aa11.48□□□□□ -0.57
ZNF550-203ENST00000376230 PALLDQ8WX93 1383 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 GTF2IP78347 998 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 CCDC178Q5BJE1 867 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 PLA2G4DQ86XP0 818 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 FRMPD2Q68DX3 1309 aaPredicted RBP11.47□□□□□ -0.57
ZNF550-203ENST00000376230 C3P01024 1663 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 TXLNAP40222 546 aa11.47□□□□□ -0.57
ZNF550-203ENST00000376230 UBA7P41226 1012 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms