RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 USP40Q9NVE5 1235 aa21.99■■□□□ 1.11
H2AFX-201ENST00000375167 EPHA10Q5JZY3 1008 aa21.99■■□□□ 1.11
H2AFX-201ENST00000375167 CCDC84Q86UT8 332 aaPredicted RBP21.99■■□□□ 1.11
H2AFX-201ENST00000375167 ZSCAN29Q8IWY8 852 aaPredicted RBP21.99■■□□□ 1.11
H2AFX-201ENST00000375167 PUS3Q9BZE2 481 aaKnown RBP21.99■■□□□ 1.11
H2AFX-201ENST00000375167 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.99■■□□□ 1.11
H2AFX-201ENST00000375167 DNM1LO00429 736 aa21.98■■□□□ 1.11
H2AFX-201ENST00000375167 RGS2P41220 211 aa21.98■■□□□ 1.11
H2AFX-201ENST00000375167 DIXDC1Q155Q3 683 aa21.98■■□□□ 1.11
H2AFX-201ENST00000375167 GAS2L1Q99501 681 aaPredicted RBP21.98■■□□□ 1.11
H2AFX-201ENST00000375167 RLFQ13129 1914 aa21.97■■□□□ 1.11
H2AFX-201ENST00000375167 WDR66Q8TBY9 1149 aa21.97■■□□□ 1.11
H2AFX-201ENST00000375167 APBA2Q99767 749 aa21.97■■□□□ 1.11
H2AFX-201ENST00000375167 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
H2AFX-201ENST00000375167 MSCO60682 206 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 ENTPD3O75355 529 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 DNAJB2P25686 324 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 MAPK4P31152 587 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 RGS3P49796 1198 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 HMGCS2P54868 508 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 CCL14Q16627 93 aa21.96■■□□□ 1.11
H2AFX-201ENST00000375167 IRX3P78415 501 aaPredicted RBP21.95■■□□□ 1.1
H2AFX-201ENST00000375167 MAP3K10Q02779 954 aa21.95■■□□□ 1.1
H2AFX-201ENST00000375167 SPP2Q13103 211 aa21.95■■□□□ 1.1
H2AFX-201ENST00000375167 CCAR1Q8IX12 1150 aaKnown RBP21.95■■□□□ 1.1
H2AFX-201ENST00000375167 ZNF576Q9H609 170 aa21.95■■□□□ 1.1
H2AFX-201ENST00000375167 METTL24Q5JXM2 366 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 AKNAD1Q5T1N1 836 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 ZNF280CQ8ND82 737 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 GPRC5AQ8NFJ5 357 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 LPAR1Q92633 364 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 USP6NLQ92738 828 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 TBC1D2Q9BYX2 928 aa21.94■■□□□ 1.1
H2AFX-201ENST00000375167 DDX20Q9UHI6 824 aaKnown RBP21.94■■□□□ 1.1
H2AFX-201ENST00000375167 CACNA1FO60840 1977 aa21.93■■□□□ 1.1
H2AFX-201ENST00000375167 RALBP1Q15311 655 aa21.93■■□□□ 1.1
H2AFX-201ENST00000375167 MFSD14CQ5VZR4 134 aa21.93■■□□□ 1.1
H2AFX-201ENST00000375167 PDLIM7Q9NR12 457 aa21.93■■□□□ 1.1
H2AFX-201ENST00000375167 ATAD5Q96QE3 1844 aa21.93■■□□□ 1.1
H2AFX-201ENST00000375167 KIF16BQ96L93 1317 aa21.92■■□□□ 1.1
H2AFX-201ENST00000375167 GRM8O00222 908 aa21.92■■□□□ 1.1
H2AFX-201ENST00000375167 SH3BP5LQ7L8J4 393 aa21.92■■□□□ 1.1
H2AFX-201ENST00000375167 SNX27Q96L92 541 aa21.92■■□□□ 1.1
H2AFX-201ENST00000375167 IDI2Q9BXS1 227 aa21.92■■□□□ 1.1
H2AFX-201ENST00000375167 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
H2AFX-201ENST00000375167 POTEEQ6S8J3 1075 aa21.91■■□□□ 1.1
H2AFX-201ENST00000375167 SLC39A5Q6ZMH5 540 aa21.91■■□□□ 1.1
H2AFX-201ENST00000375167 TIFAQ96CG3 184 aa21.91■■□□□ 1.1
H2AFX-201ENST00000375167 ADAMTS8Q9UP79 889 aa21.91■■□□□ 1.1
H2AFX-201ENST00000375167 CNGA1P29973 690 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 TRIM60Q495X7 471 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 MORN1Q5T089 497 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 GPR142Q7Z601 462 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 LRFN3Q9BTN0 628 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 CWC22Q9HCG8 908 aaKnown RBP21.9■■□□□ 1.1
H2AFX-201ENST00000375167 RFX7Q2KHR2 1363 aa21.9■■□□□ 1.1
H2AFX-201ENST00000375167 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.89■■□□□ 1.1
H2AFX-201ENST00000375167 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.89■■□□□ 1.1
H2AFX-201ENST00000375167 DDTLA6NHG4 134 aaPredicted RBP21.89■■□□□ 1.1
H2AFX-201ENST00000375167 KBTBD13C9JR72 458 aa21.89■■□□□ 1.1
H2AFX-201ENST00000375167 PDE8BO95263 885 aa21.89■■□□□ 1.1
H2AFX-201ENST00000375167 LDHBP07195 334 aaKnown RBP21.89■■□□□ 1.1
H2AFX-201ENST00000375167 IFIT1P09914 478 aaKnown RBP21.89■■□□□ 1.1
H2AFX-201ENST00000375167 SLURP2P0DP57 97 aa21.89■■□□□ 1.1
H2AFX-201ENST00000375167 PRDX5P30044 214 aa21.89■■□□□ 1.1
H2AFX-201ENST00000375167 UTYO14607 1347 aa21.89■■□□□ 1.09
H2AFX-201ENST00000375167 TCF20Q9UGU0 1960 aaKnown RBP21.89■■□□□ 1.09
H2AFX-201ENST00000375167 MUC6Q6W4X9 2439 aa21.89■■□□□ 1.09
H2AFX-201ENST00000375167 MYO9BQ13459 2157 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 SH3D19Q5HYK7 790 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 BEND3Q5T5X7 828 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 PLEKHH3Q7Z736 793 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 VGLL2Q8N8G2 317 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 ARRDC4Q8NCT1 418 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
H2AFX-201ENST00000375167 NECAB3Q96P71 396 aaPredicted RBP21.88■■□□□ 1.09
H2AFX-201ENST00000375167 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
H2AFX-201ENST00000375167 TXNRD2Q9NNW7 524 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 C9orf78Q9NZ63 289 aaPredicted RBP21.88■■□□□ 1.09
H2AFX-201ENST00000375167 MYH2Q9UKX2 1941 aa21.88■■□□□ 1.09
H2AFX-201ENST00000375167 TRIM43BA6NCK2 446 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 PEX10O60683 326 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 HERVK_113P62684 666 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 SNX17Q15036 470 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 GJC2Q5T442 439 aaPredicted RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 ALYREFQ86V81 257 aaKnown RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 TRIM43Q96BQ3 446 aaPredicted RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 APAF1O14727 1248 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 MAP2K5Q13163 448 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 PUM3Q15397 648 aaKnown RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 SH3RF1Q7Z6J0 888 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 P2RX7Q99572 595 aaKnown RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 PORCNQ9H237 461 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 TSPYL2Q9H2G4 693 aaPredicted RBP21.87■■□□□ 1.09
H2AFX-201ENST00000375167 AS3MTQ9HBK9 375 aa21.87■■□□□ 1.09
H2AFX-201ENST00000375167 MYBBP1AQ9BQG0 1328 aaKnown RBP21.86■■□□□ 1.09
H2AFX-201ENST00000375167 ERVK-9P63128 1117 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 ERVK-24P63145 666 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 PICALMQ13492 652 aa21.86■■□□□ 1.09
H2AFX-201ENST00000375167 CCDC85BQ15834 202 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms