RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 V9GY48 417 aaPredicted RBP23.71■■□□□ 1.39
TGFBR1-202ENST00000374994 TLDC2A0PJX2 215 aa23.7■■□□□ 1.39
TGFBR1-202ENST00000374994 RAPGEF1Q13905 1077 aa23.7■■□□□ 1.39
TGFBR1-202ENST00000374994 ERCC6LQ2NKX8 1250 aa23.7■■□□□ 1.39
TGFBR1-202ENST00000374994 LRMPQ12912 555 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 SEL1L2Q5TEA6 688 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 PARP1P09874 1014 aaKnown RBP23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 GLT8D2Q9H1C3 349 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 ZSCAN26Q16670 478 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 MAP3K9P80192 1104 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 CEP63Q96MT8 703 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 SETDB2Q96T68 719 aa23.7■■□□□ 1.38
TGFBR1-202ENST00000374994 MAGEA1P43355 309 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 PIK3AP1Q6ZUJ8 805 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 BICD1Q96G01 975 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 PPP2R2CQ9Y2T4 447 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 TSNARE1Q96NA8 513 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 HELBQ8NG08 1087 aaPredicted RBP23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 SMC6Q96SB8 1091 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 ZKSCAN3Q9BRR0 538 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 SPATA24Q86W54 205 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 PAIP2Q9BPZ3 127 aaKnown RBP23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 ATP6V0A2Q9Y487 856 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 MRPL12P52815 198 aaKnown RBP23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 MTMR3Q13615 1198 aa23.69■■□□□ 1.38
TGFBR1-202ENST00000374994 SCLT1Q96NL6 688 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 TAB2Q9NYJ8 693 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 NKIRAS1Q9NYS0 192 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 CFAP221Q4G0U5 840 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 PARP10Q53GL7 1025 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 ITGA6P23229 1130 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 ALDH3A1P30838 453 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 STK24Q9Y6E0 443 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 TSC1Q92574 1164 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 SLC52A2Q9HAB3 445 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 HDAC9Q9UKV0 1011 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 PYCARDQ9ULZ3 195 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 SAR1BQ9Y6B6 198 aa23.68■■□□□ 1.38
TGFBR1-202ENST00000374994 A0A0D9SFI3 127 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 LETM2Q2VYF4 491 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 KRT25Q7Z3Z0 450 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 CERS3Q8IU89 383 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 MED4Q9NPJ6 270 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 TTC37Q6PGP7 1564 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 STX10O60499 249 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 EPB41P11171 864 aaKnown RBP23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 PPFIA4O75335 1185 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 ATP6V1AP38606 617 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 ST5P78524 1137 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 PPP1R7Q15435 360 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 TRIM7Q9C029 511 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 ZBTB16Q05516 673 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 BEND3Q5T5X7 828 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 SLF1Q9BQI6 1058 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 CETN3O15182 167 aa23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 SPATS2Q86XZ4 545 aaKnown RBP23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 EAF2Q96CJ1 260 aaPredicted RBP23.67■■□□□ 1.38
TGFBR1-202ENST00000374994 DMTNQ08495 405 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 GSTA5Q7RTV2 222 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 OR8K1Q8NGG5 319 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 NELFBQ8WX92 580 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 LPIN2Q92539 896 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 RABGGTAQ92696 567 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 LZTS2Q9BRK4 669 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 MYOM2P54296 1465 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 CD2BP2O95400 341 aaKnown RBP23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 IMPG2Q9BZV3 1241 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 PLIN2Q99541 437 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 HAUS4Q9H6D7 363 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 RTEL1Q9NZ71 1219 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 LDHBP07195 334 aaKnown RBP23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 ATP2A2P16615 1042 aaKnown RBP23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 PNOCQ13519 176 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 ARMT1Q9H993 441 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 SERTAD1Q9UHV2 236 aa23.66■■□□□ 1.38
TGFBR1-202ENST00000374994 PDE8AO60658 829 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 STIM2Q9P246 746 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 ASIC2Q16515 512 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 NOSTRINQ8IVI9 506 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 NEURL1BA8MQ27 555 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 UTP11Q9Y3A2 253 aaKnown RBP23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 RFC4P35249 363 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 HAUS3Q68CZ6 603 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 SND1Q7KZF4 910 aaKnown RBP eCLIP23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 TRIM58Q8NG06 486 aa23.65■■□□□ 1.38
TGFBR1-202ENST00000374994 SH3TC1Q8TE82 1336 aa23.64■■□□□ 1.38
TGFBR1-202ENST00000374994 IKBKBO14920 756 aa23.64■■□□□ 1.38
TGFBR1-202ENST00000374994 TMEM87AQ8NBN3 555 aa23.64■■□□□ 1.38
TGFBR1-202ENST00000374994 NONOQ15233 471 aaKnown RBP eCLIP23.64■■□□□ 1.371e-6■■■□□ 16.4
TGFBR1-202ENST00000374994 PHKBQ93100 1093 aa23.64■■□□□ 1.37
TGFBR1-202ENST00000374994 HAUS7Q99871 368 aa23.64■■□□□ 1.37
TGFBR1-202ENST00000374994 MBD5Q9P267 1494 aa23.64■■□□□ 1.37
TGFBR1-202ENST00000374994 TPTE2Q6XPS3 522 aa23.64■■□□□ 1.37
TGFBR1-202ENST00000374994 CSRNP2Q9H175 543 aa23.64■■□□□ 1.37
TGFBR1-202ENST00000374994 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms