RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 STAMQ92783 540 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 FANCLQ9NW38 375 aa19.65■□□□□ 0.74
RXRB-201ENST00000374680 V9GY48 417 aaPredicted RBP19.65■□□□□ 0.74
RXRB-201ENST00000374680 ABCC12Q96J65 1359 aa19.64■□□□□ 0.74
RXRB-201ENST00000374680 ITGB4P16144 1822 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 COBLO75128 1261 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 LIFRP42702 1097 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 PDE4BQ07343 736 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 FAM177A1Q8N128 213 aaPredicted RBP19.64■□□□□ 0.73
RXRB-201ENST00000374680 TMX1Q9H3N1 280 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 TMEM232C9JQI7 657 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 FMNL1O95466 1100 aaPredicted RBP19.64■□□□□ 0.73
RXRB-201ENST00000374680 PRR29P0C7W0 189 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 ARMCX5Q6P1M9 558 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 CNNM2Q9H8M5 875 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 AATFQ9NY61 560 aaKnown RBP eCLIP19.64■□□□□ 0.73
RXRB-201ENST00000374680 SERTAD1Q9UHV2 236 aa19.64■□□□□ 0.73
RXRB-201ENST00000374680 PLEKHA8P1O95397 391 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 AKAP17AQ02040 695 aaKnown RBP19.63■□□□□ 0.73
RXRB-201ENST00000374680 ALX1Q15699 326 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 USP17L21D6R901 530 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 IFNAR1P17181 557 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.737e-7■■■■□ 21.4
RXRB-201ENST00000374680 AFMP43652 599 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 EARS2Q5JPH6 523 aaKnown RBP19.63■□□□□ 0.73
RXRB-201ENST00000374680 CRACR2BQ8N4Y2 399 aaPredicted RBP19.63■□□□□ 0.73
RXRB-201ENST00000374680 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
RXRB-201ENST00000374680 PAPPAQ13219 1627 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 MMP1P03956 469 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 CDC25BP30305 580 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 UBASH3AP57075 661 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 PARP10Q53GL7 1025 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 KRI1Q8N9T8 703 aaKnown RBP19.62■□□□□ 0.73
RXRB-201ENST00000374680 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
RXRB-201ENST00000374680 NUP98P52948 1817 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 WDR19Q8NEZ3 1342 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 CYP2D6P10635 497 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 KLHL10Q6JEL2 608 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 SPATA31A1Q5TZJ5 1347 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 TPM4P67936 248 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 LINC00116Q8NCU8 138 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 MINPP1Q9UNW1 487 aa19.62■□□□□ 0.73
RXRB-201ENST00000374680 SFPQP23246 707 aaKnown RBP eCLIP19.61■□□□□ 0.73
RXRB-201ENST00000374680 CAVIN4Q5BKX8 364 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 CREBRFQ8IUR6 639 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 STAG1Q8WVM7 1258 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 DISP2A7MBM2 1401 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 VEGFAP15692 232 aaPredicted RBP19.61■□□□□ 0.73
RXRB-201ENST00000374680 BMP6P22004 513 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 RBM6P78332 1123 aaKnown RBP19.61■□□□□ 0.73
RXRB-201ENST00000374680 RESP18Q5W5W9 173 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 OLFM4Q6UX06 510 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 KRBA2Q6ZNG9 492 aa19.61■□□□□ 0.73
RXRB-201ENST00000374680 WNT7AO00755 349 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 ENAHQ8N8S7 591 aaPredicted RBP19.6■□□□□ 0.73
RXRB-201ENST00000374680 SHISA4Q96DD7 197 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 FAM84BQ96KN1 310 aaPredicted RBP19.6■□□□□ 0.73
RXRB-201ENST00000374680 MAP7D2Q96T17 732 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 ZMYND15Q9H091 742 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 PPP6R2O75170 966 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
RXRB-201ENST00000374680 STX17P56962 302 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 ZNF174Q15697 407 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 IFIT1BQ5T764 474 aaKnown RBP19.6■□□□□ 0.73
RXRB-201ENST00000374680 ZNF384Q8TF68 577 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 ESR2Q92731 530 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 DHX58Q96C10 678 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 EPSTI1Q96J88 318 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 GNL3LQ9NVN8 582 aaKnown RBP19.6■□□□□ 0.73
RXRB-201ENST00000374680 HPSEQ9Y251 543 aa19.6■□□□□ 0.73
RXRB-201ENST00000374680 STRCQ7RTU9 1775 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 SMTNL1A8MU46 457 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 PRDX5P30044 214 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.73
RXRB-201ENST00000374680 TXNRD3Q86VQ6 643 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 CCAR2Q8N163 923 aaKnown RBP19.59■□□□□ 0.73
RXRB-201ENST00000374680 GPR101Q96P66 508 aaPredicted RBP19.59■□□□□ 0.73
RXRB-201ENST00000374680 SPEF2Q9C093 1822 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 TAF1P21675 1872 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 CUTAO60888 179 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 IGSF3O75054 1194 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 HOMER1Q86YM7 354 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 CSRNP2Q9H175 543 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 HSD3B7Q9H2F3 369 aa19.59■□□□□ 0.73
RXRB-201ENST00000374680 GNAT2P19087 354 aa19.58■□□□□ 0.73
RXRB-201ENST00000374680 DEXIO95424 95 aa19.58■□□□□ 0.73
RXRB-201ENST00000374680 NCBP1Q09161 790 aaKnown RBP19.58■□□□□ 0.73
RXRB-201ENST00000374680 E4F1Q66K89 784 aaPredicted RBP19.58■□□□□ 0.73
RXRB-201ENST00000374680 SYT10Q6XYQ8 523 aa19.58■□□□□ 0.73
RXRB-201ENST00000374680 ZNF215Q9UL58 517 aaPredicted RBP19.58■□□□□ 0.73
RXRB-201ENST00000374680 ZNF652Q9Y2D9 606 aa19.58■□□□□ 0.73
RXRB-201ENST00000374680 LRP6O75581 1613 aa19.58■□□□□ 0.73
RXRB-201ENST00000374680 COL4A1P02462 1669 aa19.58■□□□□ 0.72
RXRB-201ENST00000374680 MYH7P12883 1935 aa19.58■□□□□ 0.72
RXRB-201ENST00000374680 SMYD4Q8IYR2 804 aaPredicted RBP19.58■□□□□ 0.72
RXRB-201ENST00000374680 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms