RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 B4E1Z4 1266 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 ORC4O43929 436 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
PTPN20-202ENST00000374339 CUL4AQ13619 759 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 LHX8Q68G74 356 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 MTMR14Q8NCE2 650 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 TCEANC2Q96MN5 208 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 IDI2Q9BXS1 227 aa11.42□□□□□ -0.58
PTPN20-202ENST00000374339 CWC22Q9HCG8 908 aaKnown RBP11.42□□□□□ -0.58
PTPN20-202ENST00000374339 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.42□□□□□ -0.58
PTPN20-202ENST00000374339 CYP2D7A0A087X1C5 515 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 ERICH2A1L162 156 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 MYO1BO43795 1136 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 KDM4AO75164 1064 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 RRP12Q5JTH9 1297 aaKnown RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 IQCA1Q86XH1 822 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 TMTC2Q8N394 836 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 DPF2Q92785 391 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 BRF1Q92994 677 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 UBAC1Q9BSL1 405 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 DHX36Q9H2U1 1008 aaKnown RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 ZSWIM5Q9P217 1185 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 ANGEL1Q9UNK9 670 aaKnown RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 COL2A1P02458 1487 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 HLA-DOAP06340 250 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 LIFRP42702 1097 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 EVCP57679 992 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 ANTXR2P58335 489 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 PICALMQ13492 652 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 CHST3Q7LGC8 479 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 ZNF274Q96GC6 653 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 OSBPL5Q9H0X9 879 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 MKNK2Q9HBH9 465 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 SAP30BPQ9UHR5 308 aaKnown RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 TPCN1Q9ULQ1 816 aa11.41□□□□□ -0.58
PTPN20-202ENST00000374339 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
PTPN20-202ENST00000374339 MYH8P13535 1937 aa11.4□□□□□ -0.58
PTPN20-202ENST00000374339 IFIT3O14879 490 aaKnown RBP11.4□□□□□ -0.59
PTPN20-202ENST00000374339 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.59
PTPN20-202ENST00000374339 ENTPD3O75355 529 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 CYP2D6P10635 497 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 PRELPP51888 382 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.59
PTPN20-202ENST00000374339 COL9A3Q14050 684 aaPredicted RBP11.4□□□□□ -0.59
PTPN20-202ENST00000374339 ME3Q16798 604 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 C16orf86Q6ZW13 317 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 CYB5R4Q7L1T6 521 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 GPC2Q8N158 579 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 EHD4Q9H223 541 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 MYOZ2Q9NPC6 264 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 SWAP70Q9UH65 585 aa11.4□□□□□ -0.59
PTPN20-202ENST00000374339 SH2B2O14492 632 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 SOCS7O14512 581 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 DHX16O60231 1041 aaKnown RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 YBX3P16989 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 GMPSP49915 693 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 PLCD1P51178 756 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 APOBRQ0VD83 1088 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 NFXL1Q6ZNB6 911 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 SGMS1Q86VZ5 419 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 IGDCC4Q8TDY8 1250 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
PTPN20-202ENST00000374339 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 CHMP5Q9NZZ3 219 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 SERPINB13Q9UIV8 391 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 TACC3Q9Y6A5 838 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
PTPN20-202ENST00000374339 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
PTPN20-202ENST00000374339 KLF18A0A0U1RQI7 1052 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 CCDC69A6NI79 296 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 PFKFB2O60825 505 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 PRDM1O75626 825 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 PDIA4P13667 645 aaKnown RBP11.38□□□□□ -0.59
PTPN20-202ENST00000374339 CDK8P49336 464 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 RCAN1P53805 252 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 NFIAQ12857 509 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 WTAPQ15007 396 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 GPR162Q16538 588 aa11.38□□□□□ -0.59
PTPN20-202ENST00000374339 GTF3C6Q969F1 213 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms