RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 FOXN1O15353 648 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 ACTN2P35609 894 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 ARMCX5Q6P1M9 558 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 IGSF22Q8N9C0 903 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 SMARCC2Q8TAQ2 1214 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 GDAP1L1Q96MZ0 367 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 ADAM21Q9UKJ8 722 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 NEBLO76041 1014 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 CASP1P29466 404 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 PHKA1P46020 1223 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 CCZ1BP86790 482 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 CCZ1P86791 482 aaPredicted RBP13.72□□□□□ -0.21
NCDN-202ENST00000373243 NR5A1Q13285 461 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 CNKSR2Q8WXI2 1034 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 VPS54Q9P1Q0 977 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 MED23Q9ULK4 1368 aa13.72□□□□□ -0.21
NCDN-202ENST00000373243 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.21
NCDN-202ENST00000373243 CDC25BP30305 580 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 SLC39A14Q15043 492 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 POSTNQ15063 836 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 CCDC70Q6NSX1 233 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 CAPZA3Q96KX2 299 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 GREM2Q9H772 168 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 PPP2R2CQ9Y2T4 447 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 H0YHG0 523 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.21
NCDN-202ENST00000373243 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
NCDN-202ENST00000373243 FKBP15Q5T1M5 1219 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 E4F1Q66K89 784 aaPredicted RBP13.71□□□□□ -0.21
NCDN-202ENST00000373243 IQCA1Q86XH1 822 aa13.71□□□□□ -0.21
NCDN-202ENST00000373243 A0A1W2PQ27 194 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 A0A1W2PQ64 194 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 A0A1W2PQD8 194 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 ERCC3P19447 782 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 APOA5Q6Q788 366 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 SARM1Q6SZW1 724 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.22
NCDN-202ENST00000373243 CTCFLQ8NI51 663 aaPredicted RBP13.71□□□□□ -0.22
NCDN-202ENST00000373243 CCDC47Q96A33 483 aaKnown RBP13.71□□□□□ -0.22
NCDN-202ENST00000373243 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 ACBD3Q9H3P7 528 aa13.71□□□□□ -0.22
NCDN-202ENST00000373243 ZNHIT6Q9NWK9 470 aaKnown RBP13.71□□□□□ -0.22
NCDN-202ENST00000373243 V9GY48 417 aaPredicted RBP13.71□□□□□ -0.22
NCDN-202ENST00000373243 UBE2Q2LH0YL09 131 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 EIF3JO75822 258 aaKnown RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 MCM7P33993 719 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 FOXR1Q6PIV2 292 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 ARHGAP6O43182 974 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 GOLGA1Q92805 767 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 SAMSN1Q9NSI8 373 aaKnown RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 POLR3EQ9NVU0 708 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 NPHP4O75161 1426 aaPredicted RBP13.7□□□□□ -0.22
NCDN-202ENST00000373243 SH3TC1Q8TE82 1336 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 CUTAO60888 179 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
NCDN-202ENST00000373243 WWC3Q9ULE0 1092 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
NCDN-202ENST00000373243 NUTM2BA6NNL0 878 aaPredicted RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 NUTM2EB1AL46 878 aaPredicted RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 AKR1B15C9JRZ8 316 aaPredicted RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 IRF6O14896 467 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 PRKAB2O43741 272 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 PDE6AP16499 860 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 NBPF10Q6P3W6 841 aaKnown RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 NBPF15Q8N660 670 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 TANGO6Q9C0B7 1094 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 KIF1CO43896 1103 aaKnown RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 SGSM3Q96HU1 749 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 RABEP2Q9H5N1 569 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 GOLGA6L9A6NEM1 432 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 MPHOSPH10O00566 681 aaKnown RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 LIG3P49916 1009 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 PPARDQ03181 441 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 IFIT1BQ5T764 474 aaKnown RBP13.69□□□□□ -0.22
NCDN-202ENST00000373243 SPECC1LQ69YQ0 1117 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 CADPS2Q86UW7 1296 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 KRT23Q9C075 422 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
NCDN-202ENST00000373243 SCP2P22307 547 aa13.68□□□□□ -0.22
NCDN-202ENST00000373243 EXOSC10Q01780 885 aaKnown RBP13.68□□□□□ -0.22
NCDN-202ENST00000373243 KCNB2Q92953 911 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms