RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CDKL5O76039 1030 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 RHOXF2BP0C7M4 288 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 GUCY1A2P33402 732 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 CMTR1Q8N1G2 835 aaKnown RBP15.63■□□□□ 0.09
USP49-201ENST00000373006 PNKPQ96T60 521 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 RHOXF2Q9BQY4 288 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 ANKZF1Q9H8Y5 726 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 UBN2Q6ZU65 1347 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 CCDC151A5D8V7 595 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 SH2B2O14492 632 aaPredicted RBP15.63■□□□□ 0.09
USP49-201ENST00000373006 E2F4Q16254 413 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 ZNF569Q5MCW4 686 aa15.63■□□□□ 0.09
USP49-201ENST00000373006 GOLGA8AA7E2F4 631 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 AKR1B15C9JRZ8 316 aaPredicted RBP15.62■□□□□ 0.09
USP49-201ENST00000373006 COBLO75128 1261 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 PHACTR2O75167 634 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 CASP1P29466 404 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 RBL2Q08999 1139 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 CPDO75976 1380 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 NWD2Q9ULI1 1742 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 MYO1CO00159 1063 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 ABL1P00519 1130 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 TOB1P50616 345 aaPredicted RBP15.62■□□□□ 0.09
USP49-201ENST00000373006 NR1I3Q14994 352 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 NTRK3Q16288 839 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 ENOX1Q8TC92 643 aaKnown RBP15.62■□□□□ 0.09
USP49-201ENST00000373006 DCAF5Q96JK2 942 aa15.62■□□□□ 0.09
USP49-201ENST00000373006 FAM217BQ9NTX9 383 aaPredicted RBP15.62■□□□□ 0.09
USP49-201ENST00000373006 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
USP49-201ENST00000373006 IDH1O75874 414 aaKnown RBP15.61■□□□□ 0.09
USP49-201ENST00000373006 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 HOOK1Q9UJC3 728 aaKnown RBP15.61■□□□□ 0.09
USP49-201ENST00000373006 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 MAP2K7O14733 419 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 MYO1BO43795 1136 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 NUTM2AQ8IVF1 878 aaPredicted RBP15.61■□□□□ 0.09
USP49-201ENST00000373006 NOSTRINQ8IVI9 506 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 MLKLQ8NB16 471 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 EXOC4Q96A65 974 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 TMEM67Q5HYA8 995 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 BEND6Q5SZJ8 279 aaPredicted RBP15.61■□□□□ 0.09
USP49-201ENST00000373006 JAKMIP3Q5VZ66 844 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 IGSF22Q8N9C0 903 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 ABCB6Q9NP58 842 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 PCDHB6Q9Y5E3 794 aa15.61■□□□□ 0.09
USP49-201ENST00000373006 KIF5CO60282 957 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 CIAO1O76071 339 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 AFMP43652 599 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 NR5A1Q13285 461 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 MORC3Q14149 939 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 BRD3Q15059 726 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 DIS3L2Q8IYB7 885 aaKnown RBP15.6■□□□□ 0.09
USP49-201ENST00000373006 MCAMP43121 646 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 SSRP1Q08945 709 aaKnown RBP15.6■□□□□ 0.09
USP49-201ENST00000373006 PPFIBP1Q86W92 1011 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 SMYD4Q8IYR2 804 aaPredicted RBP15.6■□□□□ 0.09
USP49-201ENST00000373006 GOLGA5Q8TBA6 731 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 IGDCC4Q8TDY8 1250 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.6■□□□□ 0.09
USP49-201ENST00000373006 FAM89AQ96GI7 184 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
USP49-201ENST00000373006 TSPYL1Q9H0U9 437 aa15.6■□□□□ 0.09
USP49-201ENST00000373006 FOXR1Q6PIV2 292 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 TICAM2Q86XR7 235 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 ZKSCAN3Q9BRR0 538 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 CDC23Q9UJX2 597 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 FBXO2Q9UK22 296 aaPredicted RBP15.59■□□□□ 0.09
USP49-201ENST00000373006 AKAP2Q9Y2D5 859 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 ACTN2P35609 894 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 CASP14P31944 242 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 SARSP49591 514 aaKnown RBP15.59■□□□□ 0.09
USP49-201ENST00000373006 CTDSPL2Q05D32 466 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 SYNE4Q8N205 404 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 ACRBPQ8NEB7 543 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 LY9Q9HBG7 655 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 CWC15Q9P013 229 aaKnown RBP15.59■□□□□ 0.09
USP49-201ENST00000373006 DACH1Q9UI36 760 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
USP49-201ENST00000373006 MEGF6O75095 1541 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.08
USP49-201ENST00000373006 HDXQ7Z353 690 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 A0A1B0GTH6 734 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 PTPREP23469 700 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 RRP12Q5JTH9 1297 aaKnown RBP15.58■□□□□ 0.08
USP49-201ENST00000373006 SLC35F6Q8N357 371 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 CCDC102AQ96A19 550 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.08
USP49-201ENST00000373006 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
USP49-201ENST00000373006 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
USP49-201ENST00000373006 VSNL1P62760 191 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 SAFBQ15424 915 aaKnown RBP eCLIP15.57■□□□□ 0.08
USP49-201ENST00000373006 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.57■□□□□ 0.08
USP49-201ENST00000373006 CSRNP2Q9H175 543 aa15.57■□□□□ 0.08
USP49-201ENST00000373006 RRP15Q9Y3B9 282 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms