RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 EPSTI1Q96J88 318 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 EYA2O00167 538 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 PPP2R5BQ15173 497 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
VCL-202ENST00000372755 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 ADCY7P51828 1080 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 CTTNBP2NLQ9P2B4 639 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 TTC38Q5R3I4 469 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 CCDC62Q6P9F0 684 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
VCL-202ENST00000372755 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
VCL-202ENST00000372755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.84□□□□□ -0.35
VCL-202ENST00000372755 TXKP42681 527 aa12.83□□□□□ -0.35
VCL-202ENST00000372755 NONOQ15233 471 aaKnown RBP eCLIP12.83□□□□□ -0.354e-7■■■■□ 19.6
VCL-202ENST00000372755 HHATQ5VTY9 493 aa12.83□□□□□ -0.35
VCL-202ENST00000372755 VCXQ9H320 206 aa12.83□□□□□ -0.35
VCL-202ENST00000372755 POLKQ9UBT6 870 aa12.83□□□□□ -0.35
VCL-202ENST00000372755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.36
VCL-202ENST00000372755 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 MIPOL1Q8TD10 442 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 NUF2Q9BZD4 464 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.36
VCL-202ENST00000372755 I3L4J1 428 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 KIF3CO14782 793 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 GABPAQ06546 454 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 PLBD2Q8NHP8 589 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 PLCB1Q9NQ66 1216 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
VCL-202ENST00000372755 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 IVNS1ABPQ9Y6Y0 642 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 AOX1Q06278 1338 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 CNGA1P29973 690 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 MTMR3Q13615 1198 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.36
VCL-202ENST00000372755 MCUR1Q96AQ8 359 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 AZI2Q9H6S1 392 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 IMPACTQ9P2X3 320 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 ASIC3Q9UHC3 531 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
VCL-202ENST00000372755 RIMS2Q9UQ26 1411 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 SLC27A2O14975 620 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 ZBED4O75132 1171 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 BCRP11274 1271 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 IQCDQ96DY2 449 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 ARMT1Q9H993 441 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 GGA1Q9UJY5 639 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 DNM3Q9UQ16 869 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 V9GY48 417 aaPredicted RBP12.83□□□□□ -0.36
VCL-202ENST00000372755 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
VCL-202ENST00000372755 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 NDUFAB1O14561 156 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 GNPATO15228 680 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 ITGA6P23229 1130 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 FANCCQ00597 558 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 TNNI3KQ59H18 835 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 DCUN1D2Q6PH85 259 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 CEP120Q8N960 986 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 RAB3IPQ96QF0 476 aaPredicted RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 ZBTB40Q9NUA8 1239 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 LRWD1Q9UFC0 647 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 FPGT-TNNI3KV9GXZ4 949 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 DNM2P50570 870 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 CDCA7Q9BWT1 371 aaPredicted RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 PCK1P35558 622 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 APPBP2Q92624 585 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 MRRFQ96E11 262 aaKnown RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 A0A1B0GUA9 196 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 FLOT1O75955 427 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 NAA25Q14CX7 972 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 ZMYND15Q9H091 742 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 NUCKS1Q9H1E3 243 aaKnown RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 CACYBPQ9HB71 228 aaKnown RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 BABAM1Q9NWV8 329 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 ZNF131P52739 623 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 NLRP12P59046 1061 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 YWHAEP62258 255 aaKnown RBP12.82□□□□□ -0.36
VCL-202ENST00000372755 PAK2Q13177 524 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
VCL-202ENST00000372755 NPATQ14207 1427 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 PDE8AO60658 829 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 SATB1Q01826 763 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 TSNAXIP1Q2TAA8 658 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 CUL4BQ13620 913 aa12.81□□□□□ -0.36
VCL-202ENST00000372755 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
VCL-202ENST00000372755 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms