RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 ABCA6Q8N139 1617 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 ERICH4A6NGS2 130 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 FANCCQ00597 558 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 PAK1Q13153 545 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 DPP8Q6V1X1 898 aaPredicted RBP11.79□□□□□ -0.52
NUP188-201ENST00000372577 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 POLR2DO15514 142 aaKnown RBP11.79□□□□□ -0.52
NUP188-201ENST00000372577 NT5C2P49902 561 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 CCDC155Q8N6L0 562 aa11.79□□□□□ -0.52
NUP188-201ENST00000372577 POLR3GO15318 223 aaPredicted RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 ACTN2P35609 894 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 PDE6BP35913 854 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 PDE4DQ08499 809 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 POSTNQ15063 836 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 E9PCH4 1651 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 JAK2O60674 1132 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 MAATS1Q7Z4T9 603 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 TULP4Q9NRJ4 1543 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 PDE8BO95263 885 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 POLA2Q14181 598 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 STMN4Q9H169 189 aaPredicted RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 CTNND2Q9UQB3 1225 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 PHACTR2O75167 634 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 DDAH1O94760 285 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
NUP188-201ENST00000372577 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
NUP188-201ENST00000372577 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.52
NUP188-201ENST00000372577 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.52
NUP188-201ENST00000372577 HEG1Q9ULI3 1381 aa11.77□□□□□ -0.52
NUP188-201ENST00000372577 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.52
NUP188-201ENST00000372577 PALD1Q9ULE6 856 aa11.77□□□□□ -0.52
NUP188-201ENST00000372577 FSD2A1L4K1 749 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 CALUO43852 315 aaPredicted RBP11.77□□□□□ -0.53
NUP188-201ENST00000372577 GADD45BO75293 160 aaPredicted RBP11.77□□□□□ -0.53
NUP188-201ENST00000372577 TRIML1Q8N9V2 468 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 ZSCAN10Q96SZ4 725 aaPredicted RBP11.77□□□□□ -0.53
NUP188-201ENST00000372577 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 H0YIN7 160 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 ZSWIM4Q9H7M6 989 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.53
NUP188-201ENST00000372577 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 TBC1D8BQ0IIM8 1120 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 CUL4AQ13619 759 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 BCCIPQ9P287 314 aaKnown RBP eCLIP11.77□□□□□ -0.53
NUP188-201ENST00000372577 USP21Q9UK80 565 aa11.77□□□□□ -0.53
NUP188-201ENST00000372577 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 TMTC1Q8IUR5 882 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 NOSTRINQ8IVI9 506 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
NUP188-201ENST00000372577 PHKBQ93100 1093 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 ARID4AP29374 1257 aaPredicted RBP11.76□□□□□ -0.53
NUP188-201ENST00000372577 TFAP4Q01664 338 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 SPECC1LQ69YQ0 1117 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 SYT10Q6XYQ8 523 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 TMEM63CQ9P1W3 806 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 DBNLQ9UJU6 430 aaKnown RBP11.76□□□□□ -0.53
NUP188-201ENST00000372577 NDUFB9Q9Y6M9 179 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 TRAF5O00463 557 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 TNNC1P63316 161 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 FAM173BQ6P4H8 233 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 FCHSD1Q86WN1 690 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 CCDC51Q96ER9 411 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 CCDC77Q9BR77 488 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 LRWD1Q9UFC0 647 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 JAG2Q9Y219 1238 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 PRDM1O75626 825 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 CMA1P23946 247 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
NUP188-201ENST00000372577 CETN3O15182 167 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 INCENPQ9NQS7 918 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 FGAP02671 866 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 CSGALNACT2Q8N6G5 542 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 NUCKS1Q9H1E3 243 aaKnown RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 MRVI1Q9Y6F6 885 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 NCBP1Q09161 790 aaKnown RBP11.75□□□□□ -0.53
NUP188-201ENST00000372577 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
NUP188-201ENST00000372577 FANCBQ8NB91 859 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms