RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TNFAIP1Q13829 316 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 MCTP1Q6DN14 999 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 CDC37L1Q7L3B6 337 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 MAPKAPK5Q8IW41 473 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 GZF1Q9H116 711 aaPredicted RBP18.93■□□□□ 0.62
C9orf78-201ENST00000372447 SH2B1Q9NRF2 756 aaPredicted RBP18.93■□□□□ 0.62
C9orf78-201ENST00000372447 TAF6LQ9Y6J9 622 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 POLR2AP24928 1970 aaKnown RBP18.93■□□□□ 0.62
C9orf78-201ENST00000372447 RPS6KB1P23443 525 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 FAM83AQ86UY5 434 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 TMEM39BQ9GZU3 492 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 ALDH8A1Q9H2A2 487 aaPredicted RBP18.93■□□□□ 0.62
C9orf78-201ENST00000372447 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
C9orf78-201ENST00000372447 ENTPD3O75355 529 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 NPM3O75607 178 aaKnown RBP18.92■□□□□ 0.62
C9orf78-201ENST00000372447 USP5P45974 858 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 TNNI2P48788 182 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 PRAMEF18Q5VWM3 479 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 FAM151AQ8WW52 585 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 MKRN1Q9UHC7 482 aaKnown RBP18.92■□□□□ 0.62
C9orf78-201ENST00000372447 FLT1P17948 1338 aa18.92■□□□□ 0.62
C9orf78-201ENST00000372447 GSG1L2A8MUP6 293 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 LARGE1O95461 756 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 ANKRD1Q15327 319 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 CDAN1Q8IWY9 1227 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 RBM46Q8TBY0 533 aaKnown RBP18.91■□□□□ 0.62
C9orf78-201ENST00000372447 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-201ENST00000372447 ITGBL1O95965 494 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-201ENST00000372447 GNAT2P19087 354 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 FMR1Q06787 632 aaKnown RBP eCLIP18.91■□□□□ 0.62
C9orf78-201ENST00000372447 SH3BP5LQ7L8J4 393 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 SMC1BQ8NDV3 1235 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 TEPSINQ96N21 525 aa18.91■□□□□ 0.62
C9orf78-201ENST00000372447 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
C9orf78-201ENST00000372447 PATL2C9JE40 543 aaKnown RBP18.9■□□□□ 0.62
C9orf78-201ENST00000372447 TRAF5O00463 557 aa18.9■□□□□ 0.62
C9orf78-201ENST00000372447 FOXP2O15409 715 aa18.9■□□□□ 0.62
C9orf78-201ENST00000372447 CYP21A2P08686 494 aa18.9■□□□□ 0.62
C9orf78-201ENST00000372447 COL9A3Q14050 684 aaPredicted RBP18.9■□□□□ 0.62
C9orf78-201ENST00000372447 FOXD4L5Q5VV16 416 aaPredicted RBP18.9■□□□□ 0.62
C9orf78-201ENST00000372447 FOXD4L4Q8WXT5 416 aaPredicted RBP18.9■□□□□ 0.62
C9orf78-201ENST00000372447 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
C9orf78-201ENST00000372447 SMC3Q9UQE7 1217 aa18.9■□□□□ 0.62
C9orf78-201ENST00000372447 DDTLA6NHG4 134 aaPredicted RBP18.89■□□□□ 0.61
C9orf78-201ENST00000372447 APPP05067 770 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 ME3Q16798 604 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 CCDC83Q8IWF9 413 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 NEK1Q96PY6 1258 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
C9orf78-201ENST00000372447 TPCN1Q9ULQ1 816 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 PPP2R3BQ9Y5P8 575 aa18.89■□□□□ 0.61
C9orf78-201ENST00000372447 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
C9orf78-201ENST00000372447 HSPD1P10809 573 aaKnown RBP18.88■□□□□ 0.61
C9orf78-201ENST00000372447 NBPF12Q5TAG4 269 aaPredicted RBP18.88■□□□□ 0.61
C9orf78-201ENST00000372447 ZSCAN29Q8IWY8 852 aaPredicted RBP18.88■□□□□ 0.61
C9orf78-201ENST00000372447 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
C9orf78-201ENST00000372447 SAP30BPQ9UHR5 308 aaKnown RBP18.88■□□□□ 0.61
C9orf78-201ENST00000372447 KLHL40Q2TBA0 621 aa18.88■□□□□ 0.61
C9orf78-201ENST00000372447 IFNL3Q8IZI9 196 aa18.88■□□□□ 0.61
C9orf78-201ENST00000372447 CDCA5Q96FF9 252 aa18.88■□□□□ 0.61
C9orf78-201ENST00000372447 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
C9orf78-201ENST00000372447 CDK5RAP2Q96SN8 1893 aa18.87■□□□□ 0.61
C9orf78-201ENST00000372447 TOB2Q14106 344 aaPredicted RBP18.87■□□□□ 0.61
C9orf78-201ENST00000372447 SLC4A8Q2Y0W8 1093 aa18.87■□□□□ 0.61
C9orf78-201ENST00000372447 TCEANC2Q96MN5 208 aa18.87■□□□□ 0.61
C9orf78-201ENST00000372447 DDX49Q9Y6V7 483 aaKnown RBP18.87■□□□□ 0.61
C9orf78-201ENST00000372447 ATRNL1Q5VV63 1379 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 ST3GAL1Q11201 340 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 GIMAP6Q6P9H5 292 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 CSRNP1Q96S65 589 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 USP17L12C9JPN9 530 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 USP17L21D6R901 530 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
C9orf78-201ENST00000372447 CTR9Q6PD62 1173 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 NACAP1Q9BZK3 213 aa18.86■□□□□ 0.61
C9orf78-201ENST00000372447 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
C9orf78-201ENST00000372447 FOCADQ5VW36 1801 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 PASKQ96RG2 1323 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 FSD2A1L4K1 749 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 GOLGA6L3A6NEY3 463 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 PRPF40AO75400 957 aaKnown RBP18.85■□□□□ 0.61
C9orf78-201ENST00000372447 HMGB1P09429 215 aaKnown RBP18.85■□□□□ 0.61
C9orf78-201ENST00000372447 SLURP2P0DP57 97 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 GJB2P29033 226 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 PLCD1P51178 756 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 EVX2Q03828 476 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 FSTL1Q12841 308 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
C9orf78-201ENST00000372447 STX6O43752 255 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 FGAP02671 866 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 POLR3DP05423 398 aaPredicted RBP18.84■□□□□ 0.61
C9orf78-201ENST00000372447 CYP2D6P10635 497 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 SYT1P21579 422 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 TDO2P48775 406 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 SUPT20HL1Q3ZLR7 823 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 STOX1Q6ZVD7 989 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
C9orf78-201ENST00000372447 NAPBQ9H115 298 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms