RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SIPA1L1O43166 1804 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 PSMA5P28066 241 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 GABPAQ06546 454 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 PDE4BQ07343 736 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 MFSD6Q6ZSS7 791 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 STOX1Q6ZVD7 989 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 C16orf86Q6ZW13 317 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 DEFB129Q9H1M3 183 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 CNNM2Q9H8M5 875 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 ZNF287Q9HBT7 754 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 SERPINB13Q9UIV8 391 aa18.78■□□□□ 0.6
TMEM53-204ENST00000372243 HMGB1P09429 215 aaKnown RBP18.77■□□□□ 0.6
TMEM53-204ENST00000372243 TRDNQ13061 729 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 ADCK5Q3MIX3 580 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 TEPSINQ96N21 525 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 NEK1Q96PY6 1258 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 CSRNP1Q96S65 589 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 TMEM39BQ9GZU3 492 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 SWAP70Q9UH65 585 aa18.77■□□□□ 0.6
TMEM53-204ENST00000372243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.6
TMEM53-204ENST00000372243 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 ORC4O43929 436 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 EVX2Q03828 476 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 SLC4A8Q2Y0W8 1093 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 NCOA7Q8NI08 942 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 KRT23Q9C075 422 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 HERC5Q9UII4 1024 aaKnown RBP18.76■□□□□ 0.59
TMEM53-204ENST00000372243 TBC1D12O60347 775 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 EAPPQ56P03 285 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-204ENST00000372243 SULF1Q8IWU6 871 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 JAKMIP1Q96N16 626 aaKnown RBP18.76■□□□□ 0.59
TMEM53-204ENST00000372243 ZSWIM6Q9HCJ5 1215 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 TACC3Q9Y6A5 838 aa18.76■□□□□ 0.59
TMEM53-204ENST00000372243 POLR2AP24928 1970 aaKnown RBP18.76■□□□□ 0.59
TMEM53-204ENST00000372243 MAP3K10Q02779 954 aa18.75■□□□□ 0.59
TMEM53-204ENST00000372243 RABEP1Q15276 862 aa18.75■□□□□ 0.59
TMEM53-204ENST00000372243 RALYLQ86SE5 291 aaKnown RBP18.75■□□□□ 0.59
TMEM53-204ENST00000372243 HOOK2Q96ED9 719 aa18.75■□□□□ 0.59
TMEM53-204ENST00000372243 DYNLL2Q96FJ2 89 aa18.75■□□□□ 0.59
TMEM53-204ENST00000372243 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
TMEM53-204ENST00000372243 NEDD4P46934 1319 aa18.74■□□□□ 0.59
TMEM53-204ENST00000372243 CDK8P49336 464 aa18.74■□□□□ 0.59
TMEM53-204ENST00000372243 CRACR2BQ8N4Y2 399 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-204ENST00000372243 TSHZ2Q9NRE2 1034 aa18.74■□□□□ 0.59
TMEM53-204ENST00000372243 CASTP20810 708 aaKnown RBP18.73■□□□□ 0.59
TMEM53-204ENST00000372243 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 RUFY3Q7L099 469 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
TMEM53-204ENST00000372243 ESR2Q92731 530 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 MKNK2Q9HBH9 465 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 SCAF8Q9UPN6 1271 aaKnown RBP18.73■□□□□ 0.59
TMEM53-204ENST00000372243 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 WDR19Q8NEZ3 1342 aa18.73■□□□□ 0.59
TMEM53-204ENST00000372243 TATDN1Q6P1N9 297 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 DHX32Q7L7V1 743 aaKnown RBP18.72■□□□□ 0.59
TMEM53-204ENST00000372243 KRT26Q7Z3Y9 468 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 LDHDQ86WU2 507 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 STK11IPQ8N1F8 1099 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 TRIM34Q9BYJ4 488 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 DNAJC18Q9H819 358 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 MYH8P13535 1937 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 B4E1Z4 1266 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 RASA1P20936 1047 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 RPS6KB1P23443 525 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 MCM5P33992 734 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 SHMT1P34896 483 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 SUPT20HL1Q3ZLR7 823 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 ZNF444Q8N0Y2 327 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-204ENST00000372243 SLC44A5Q8NCS7 719 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 ZNF526Q8TF50 670 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-204ENST00000372243 MTA3Q9BTC8 594 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 TOMM22Q9NS69 142 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
TMEM53-204ENST00000372243 KDM4AO75164 1064 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 PRDM1O75626 825 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 EXOSC10Q01780 885 aaKnown RBP18.71■□□□□ 0.59
TMEM53-204ENST00000372243 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
TMEM53-204ENST00000372243 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
TMEM53-204ENST00000372243 NEK4P51957 841 aa18.7■□□□□ 0.58
TMEM53-204ENST00000372243 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
TMEM53-204ENST00000372243 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-204ENST00000372243 DCAF15Q66K64 600 aa18.7■□□□□ 0.58
TMEM53-204ENST00000372243 UPF3BQ9BZI7 483 aaKnown RBP18.7■□□□□ 0.58
TMEM53-204ENST00000372243 ALDH8A1Q9H2A2 487 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-204ENST00000372243 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
TMEM53-204ENST00000372243 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
TMEM53-204ENST00000372243 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-204ENST00000372243 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
TMEM53-204ENST00000372243 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-204ENST00000372243 TSPY2A6NKD2 308 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 ANTXR2P58335 489 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 CYB5R4Q7L1T6 521 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
TMEM53-204ENST00000372243 NKX2-3Q8TAU0 364 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms