RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 RAB3GAP1Q15042 981 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 NKIRAS1Q9NYS0 192 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 PRKG1Q13976 671 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 SEPT12Q8IYM1 358 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 NLGN1Q8N2Q7 840 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 ZBTB43O43298 467 aa15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 LARP6Q9BRS8 491 aaKnown RBP15.73■□□□□ 0.11
RAPGEF1-202ENST00000372190 KLF18A0A0U1RQI7 1052 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 SMIM23A6NLE4 172 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 CYLC1P35663 651 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 FAM182BQ5T319 152 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 ORC3Q9UBD5 711 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 PRPHP41219 470 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 INPP1P49441 399 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 ZNF165P49910 485 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 RTN1Q16799 776 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 Q9H521 79 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
RAPGEF1-202ENST00000372190 EYA2O00167 538 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 KIAA1524Q8TCG1 905 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 ZFXP17010 805 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 STXBP4Q6ZWJ1 553 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 VPS52Q8N1B4 723 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 ERMNQ8TAM6 284 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 NAPAP54920 295 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 CCDC62Q6P9F0 684 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 SDCCAG8Q86SQ7 713 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 ARL1P40616 181 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 ZKSCAN8Q15776 578 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 PDCD2Q16342 344 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 TTC41PQ6P2S7 1318 aa15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 KDM5AP29375 1690 aaKnown RBP15.71■□□□□ 0.11
RAPGEF1-202ENST00000372190 AMPD3Q01432 767 aa15.71■□□□□ 0.1
RAPGEF1-202ENST00000372190 RRP36Q96EU6 259 aaKnown RBP15.71■□□□□ 0.1
RAPGEF1-202ENST00000372190 TFIP11Q9UBB9 837 aaKnown RBP15.71■□□□□ 0.1
RAPGEF1-202ENST00000372190 BCAP29Q9UHQ4 241 aa15.71■□□□□ 0.1
RAPGEF1-202ENST00000372190 ROBO2Q9HCK4 1378 aa15.71■□□□□ 0.1
RAPGEF1-202ENST00000372190 LOC102724428A0A0B4J2F2 783 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 MTIF2P46199 727 aaKnown RBP15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 SIK1P57059 783 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 CALCOCO2Q13137 446 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 TMED1Q13445 227 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 TRIM68Q6AZZ1 485 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 CABS1Q96KC9 395 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 TAF5LO75529 589 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 PDE1AP54750 535 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 BICD1Q96G01 975 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 UIMC1Q96RL1 719 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 RIPOR2Q9Y4F9 1068 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 NUCB1Q02818 461 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 ERO1AQ96HE7 468 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 BIN1O00499 593 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 U2AF2P26368 475 aaKnown RBP eCLIP15.7■□□□□ 0.11e-7■■■■■ 32.6
RAPGEF1-202ENST00000372190 NMIQ13287 307 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 HIP1RO75146 1068 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 VSIG1Q86XK7 387 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 STAG1Q8WVM7 1258 aa15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 MTRF1LQ9UGC7 380 aaKnown RBP15.7■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZSCAN22P10073 491 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 ARHGEF10LQ9HCE6 1279 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 AFF2P51816 1311 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 SYF2O95926 243 aaKnown RBP15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CALM1P0DP23 149 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CALM2P0DP24 149 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CALM3P0DP25 149 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZNF131P52739 623 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 MAP3K21Q5TCX8 1036 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 G2E3Q7L622 706 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 SYCP3Q8IZU3 236 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 KIF1BO60333 1816 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CREB3O43889 395 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZSCAN26Q16670 478 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 TMX3Q96JJ7 454 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 CAPZA3Q96KX2 299 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 TACO1Q9BSH4 297 aaKnown RBP15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 SCINQ9Y6U3 715 aa15.69■□□□□ 0.1
RAPGEF1-202ENST00000372190 PTPRTO14522 1441 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 CETN1Q12798 172 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 USPL1Q5W0Q7 1092 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 FERMT2Q96AC1 680 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 RASSF2P50749 326 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF1-202ENST00000372190 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms