RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 DCP1AQ9NPI6 582 aaPredicted RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 TCHHQ07283 1943 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 B4E1Z4 1266 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 CTDSPL2Q05D32 466 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 PPARAQ07869 468 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 CCDC178Q5BJE1 867 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 FERMT3Q86UX7 667 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 FAM184AQ8NB25 1140 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
LDB3-203ENST00000372056 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 KIF3AQ9Y496 699 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 TACC3Q9Y6A5 838 aa15.18■□□□□ 0.02
LDB3-203ENST00000372056 DYNLL1P63167 89 aaKnown RBP15.17■□□□□ 0.02
LDB3-203ENST00000372056 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
LDB3-203ENST00000372056 TEX11Q8IYF3 940 aa15.17■□□□□ 0.02
LDB3-203ENST00000372056 DAGLAQ9Y4D2 1042 aa15.17■□□□□ 0.02
LDB3-203ENST00000372056 FIBPO43427 364 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
LDB3-203ENST00000372056 FGRP09769 529 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
LDB3-203ENST00000372056 CRKP46108 304 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 MRE11P49959 708 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 EIF6P56537 245 aaKnown RBP15.16■□□□□ 0.02
LDB3-203ENST00000372056 DIXDC1Q155Q3 683 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 TTC6Q86TZ1 520 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 CERS5Q8N5B7 392 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 ESR2Q92731 530 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 MTMR14Q8NCE2 650 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 IGDCC4Q8TDY8 1250 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 SDR42E1Q8WUS8 393 aa15.16■□□□□ 0.02
LDB3-203ENST00000372056 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
LDB3-203ENST00000372056 ERICH2A1L162 156 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 H3BQV1 296 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 KDM4AO75164 1064 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 UBE2HP62256 183 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 KRT85P78386 507 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 RESTQ13127 1097 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 IFFO2Q5TF58 517 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 CTR9Q6PD62 1173 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
LDB3-203ENST00000372056 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
LDB3-203ENST00000372056 GRPEL1Q9HAV7 217 aa15.15■□□□□ 0.02
LDB3-203ENST00000372056 YDJCA8MPS7 323 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 USP17L12C9JPN9 530 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 USP17L21D6R901 530 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 NFKBIEO00221 500 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 ORC4O43929 436 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
LDB3-203ENST00000372056 RHBDL3P58872 404 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
LDB3-203ENST00000372056 DPF2Q92785 391 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 SYT17Q9BSW7 474 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 LY9Q9HBG7 655 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 MCM9Q9NXL9 1143 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 TMOD2Q9NZR1 351 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 POLR3DP05423 398 aaPredicted RBP15.14■□□□□ 0.01
LDB3-203ENST00000372056 LMNB1P20700 586 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 PPP2R5BQ15173 497 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 GRIK5Q16478 980 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 FAM173BQ6P4H8 233 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 APOA5Q6Q788 366 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 GMLQ99445 158 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 IDI2Q9BXS1 227 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 ZSCAN16Q9H4T2 348 aaPredicted RBP15.14■□□□□ 0.01
LDB3-203ENST00000372056 USP40Q9NVE5 1235 aa15.14■□□□□ 0.01
LDB3-203ENST00000372056 ROBO3Q96MS0 1386 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 MYO1BO43795 1136 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 USP17L8P0C7I0 530 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 LIFRP42702 1097 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 RCAN1P53805 252 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 TMEM67Q5HYA8 995 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 NLGN2Q8NFZ4 835 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 TGFBRAP1Q8WUH2 860 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 SYAP1Q96A49 352 aaPredicted RBP15.13■□□□□ 0.01
LDB3-203ENST00000372056 SENP2Q9HC62 589 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 ELP1O95163 1332 aa15.13■□□□□ 0.01
LDB3-203ENST00000372056 FZD9O00144 591 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 PSMD14O00487 310 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 PPFIA3O75145 1194 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 RBM5P52756 815 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDB3-203ENST00000372056 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
LDB3-203ENST00000372056 RAB11FIP4Q86YS3 637 aa15.12■□□□□ 0.01
LDB3-203ENST00000372056 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
LDB3-203ENST00000372056 CPLX1O14810 134 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms