RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 NOL10Q9BSC4 688 aaKnown RBP12.88□□□□□ -0.35
LCN1-202ENST00000371781 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
LCN1-202ENST00000371781 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
LCN1-202ENST00000371781 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
LCN1-202ENST00000371781 COL2A1P02458 1487 aaPredicted RBP12.88□□□□□ -0.35
LCN1-202ENST00000371781 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
LCN1-202ENST00000371781 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
LCN1-202ENST00000371781 PLCG2P16885 1265 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 CERS3Q8IU89 383 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 NCOA7Q8NI08 942 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
LCN1-202ENST00000371781 MYH8P13535 1937 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 CLRN2A0PK11 232 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 DDTLA6NHG4 134 aaPredicted RBP12.86□□□□□ -0.35
LCN1-202ENST00000371781 ORC4O43929 436 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 KDM4AO75164 1064 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 GABPAQ06546 454 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 BRF1Q92994 677 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
LCN1-202ENST00000371781 CAPN15O75808 1086 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
LCN1-202ENST00000371781 RASA1P20936 1047 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 RPS12P25398 132 aaKnown RBP12.85□□□□□ -0.35
LCN1-202ENST00000371781 RBM5P52756 815 aaKnown RBP eCLIP12.85□□□□□ -0.35
LCN1-202ENST00000371781 APOBRQ0VD83 1088 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 TNIP1Q15025 636 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 SEC23AQ15436 765 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 NBPF9Q3BBW0 867 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
LCN1-202ENST00000371781 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 TRPM4Q8TD43 1214 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 ZNF70Q9UC06 446 aaPredicted RBP12.85□□□□□ -0.35
LCN1-202ENST00000371781 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 GJA3Q9Y6H8 435 aa12.85□□□□□ -0.35
LCN1-202ENST00000371781 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
LCN1-202ENST00000371781 WNT10BO00744 389 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
LCN1-202ENST00000371781 MCM5P33992 734 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 MCM2P49736 904 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
LCN1-202ENST00000371781 EVCP57679 992 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
LCN1-202ENST00000371781 RRP12Q5JTH9 1297 aaKnown RBP12.84□□□□□ -0.35
LCN1-202ENST00000371781 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 SLKQ9H2G2 1235 aaPredicted RBP12.84□□□□□ -0.35
LCN1-202ENST00000371781 LIMCH1Q9UPQ0 1083 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
LCN1-202ENST00000371781 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 GLTPD2A6NH11 291 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 NMT2O60551 498 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
LCN1-202ENST00000371781 SHMT1P34896 483 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 TCP10Q12799 353 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 DPF2Q92785 391 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
LCN1-202ENST00000371781 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
LCN1-202ENST00000371781 CNNM2Q9H8M5 875 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 HDAC9Q9UKV0 1011 aa12.83□□□□□ -0.36
LCN1-202ENST00000371781 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
LCN1-202ENST00000371781 NID2Q14112 1375 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 PAPPA2Q9BXP8 1791 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 ENTPD3O75355 529 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 DDNO94850 711 aaPredicted RBP12.82□□□□□ -0.36
LCN1-202ENST00000371781 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 CDK8P49336 464 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 SCRN1Q12765 414 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 RRP1BQ14684 758 aaKnown RBP12.82□□□□□ -0.36
LCN1-202ENST00000371781 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
LCN1-202ENST00000371781 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 KRT23Q9C075 422 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 GPRC5DQ9NZD1 345 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 CNOT7Q9UIV1 285 aaKnown RBP12.82□□□□□ -0.36
LCN1-202ENST00000371781 TNKSO95271 1327 aa12.82□□□□□ -0.36
LCN1-202ENST00000371781 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
LCN1-202ENST00000371781 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
LCN1-202ENST00000371781 PFKFB2O60825 505 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms