RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 RASGRP2Q7LDG7 609 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 TEX11Q8IYF3 940 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 TSEN2Q8NCE0 465 aaKnown RBP10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 CCDC148Q8NFR7 591 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 KAZALD1Q96I82 304 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 C8orf76Q96K31 380 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 MYH8P13535 1937 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 PEAK1Q9H792 1746 aa10.68□□□□□ -0.7
HMGCLL1-204ENST00000370852 GOLGA6BA6NDN3 693 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 EXOSC10Q01780 885 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 GUCY1A3Q02108 690 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 C2orf54Q08AI8 447 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 KCTD19Q17RG1 926 aaPredicted RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 WHAMMP3Q1A5X7 153 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 ACCSLQ4AC99 568 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 APTXQ7Z2E3 356 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 ANKRD18AQ8IVF6 992 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SLC40A1Q9NP59 571 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 HPSEQ9Y251 543 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 MYO1BO43795 1136 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 YEATS4O95619 227 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 CLNS1AP54105 237 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 ATL3Q6DD88 541 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 KLHL10Q6JEL2 608 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SYNE3Q6ZMZ3 975 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SND1Q7KZF4 910 aaKnown RBP eCLIP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 AMOTL1Q8IY63 956 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 CCDC13Q8IYE1 715 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 JMYQ8N9B5 988 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 TBC1D22AQ8WUA7 517 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 NUDT16Q96DE0 195 aaKnown RBP10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 BORCS6Q96GS4 357 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SUCLG2Q96I99 432 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SCLT1Q96NL6 688 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 SH3GL2Q99962 352 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
HMGCLL1-204ENST00000370852 PIK3C2BO00750 1634 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 HIP1O00291 1037 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 RASSF9O75901 435 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 GYPCP04921 128 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 SLC7A5Q01650 507 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 PPARAQ07869 468 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 IFT88Q13099 833 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 KRT32Q14532 448 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 WLSQ5T9L3 541 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 ARMC3Q5W041 872 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 CCNI2Q6ZMN8 369 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 CHP1Q99653 195 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 KIF9Q9HAQ2 790 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 C9orf78Q9NZ63 289 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 SMARCAL1Q9NZC9 954 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 REXO2Q9Y3B8 237 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 BACH1O14867 736 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 AP1G2O75843 785 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 PEX19P40855 299 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 HDLBPQ00341 1268 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 PROSER3Q2NL68 480 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 CCDC40Q4G0X9 1142 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 CEP85LQ5SZL2 805 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 PANX2Q96RD6 677 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 EYA1Q99502 592 aa10.66□□□□□ -0.7
HMGCLL1-204ENST00000370852 E7EWF7 191 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 ATP2C2O75185 946 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 KIAA0754O94854 1291 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 RXRAP19793 462 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 KIF23Q02241 960 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 SNX1Q13596 522 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 NAA25Q14CX7 972 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 SLC39A14Q15043 492 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 CEP120Q8N960 986 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 ZNF483Q8TF39 744 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 SH3BP1Q9Y3L3 701 aa10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 CEP170BQ9Y4F5 1589 aaPredicted RBP10.65□□□□□ -0.7
HMGCLL1-204ENST00000370852 A0A1B0GTH6 734 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 MFAP3LO75121 409 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 KRT14P02533 472 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 CCT6AP40227 531 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 NAP1L1P55209 391 aaKnown RBP10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 HAND2P61296 217 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 NAA35Q5VZE5 725 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 TRAPPC11Q7Z392 1133 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 PPFIBP1Q86W92 1011 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 PARD3BQ8TEW8 1205 aa10.65□□□□□ -0.71
HMGCLL1-204ENST00000370852 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms