RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CYP2E1P05181 493 aaPredicted RBP18.51■□□□□ 0.55
SS18L1-202ENST00000370848 MECOMQ03112 1051 aa18.51■□□□□ 0.55
SS18L1-202ENST00000370848 GCC1Q96CN9 775 aa18.51■□□□□ 0.55
SS18L1-202ENST00000370848 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
SS18L1-202ENST00000370848 AFG3L2Q9Y4W6 797 aa18.51■□□□□ 0.55
SS18L1-202ENST00000370848 DDTLA6NHG4 134 aaPredicted RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 CTNND1O60716 968 aaKnown RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 IFIT2P09913 472 aaKnown RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 PTPRAP18433 802 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 EN2P19622 333 aaPredicted RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 BTDP43251 543 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 ERICH6Q7L0X2 663 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 TRIM47Q96LD4 638 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 PARK7Q99497 189 aaKnown RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 PIH1D3Q9NQM4 214 aaKnown RBP18.5■□□□□ 0.55
SS18L1-202ENST00000370848 SRRDQ9UH36 339 aa18.5■□□□□ 0.55
SS18L1-202ENST00000370848 FOCADQ5VW36 1801 aa18.49■□□□□ 0.55
SS18L1-202ENST00000370848 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
SS18L1-202ENST00000370848 RAI14Q9P0K7 980 aa18.49■□□□□ 0.55
SS18L1-202ENST00000370848 SIPA1L1O43166 1804 aa18.49■□□□□ 0.55
SS18L1-202ENST00000370848 FASTKD5Q7L8L6 764 aaKnown RBP18.48■□□□□ 0.55
SS18L1-202ENST00000370848 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
SS18L1-202ENST00000370848 CPA4Q9UI42 421 aa18.48■□□□□ 0.55
SS18L1-202ENST00000370848 ATAD5Q96QE3 1844 aa18.47■□□□□ 0.55
SS18L1-202ENST00000370848 OSBPP22059 807 aa18.47■□□□□ 0.55
SS18L1-202ENST00000370848 GSTO1P78417 241 aa18.47■□□□□ 0.55
SS18L1-202ENST00000370848 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
SS18L1-202ENST00000370848 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
SS18L1-202ENST00000370848 CDK5RAP2Q96SN8 1893 aa18.46■□□□□ 0.55
SS18L1-202ENST00000370848 LDHCP07864 332 aa18.46■□□□□ 0.55
SS18L1-202ENST00000370848 PSMC4P43686 418 aa18.46■□□□□ 0.55
SS18L1-202ENST00000370848 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
SS18L1-202ENST00000370848 PICK1Q9NRD5 415 aa18.46■□□□□ 0.55
SS18L1-202ENST00000370848 HOXD10P28358 340 aa18.45■□□□□ 0.54
SS18L1-202ENST00000370848 TSHZ3Q63HK5 1081 aa18.45■□□□□ 0.54
SS18L1-202ENST00000370848 SH3TC2Q8TF17 1288 aa18.45■□□□□ 0.54
SS18L1-202ENST00000370848 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
SS18L1-202ENST00000370848 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
SS18L1-202ENST00000370848 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
SS18L1-202ENST00000370848 UBE2Q1Q7Z7E8 422 aa18.44■□□□□ 0.54
SS18L1-202ENST00000370848 ADGRA1Q86SQ6 560 aa18.44■□□□□ 0.54
SS18L1-202ENST00000370848 OTUD7AQ8TE49 926 aaPredicted RBP18.44■□□□□ 0.54
SS18L1-202ENST00000370848 SHISA4Q96DD7 197 aa18.44■□□□□ 0.54
SS18L1-202ENST00000370848 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
SS18L1-202ENST00000370848 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
SS18L1-202ENST00000370848 IDH1O75874 414 aaKnown RBP18.43■□□□□ 0.54
SS18L1-202ENST00000370848 CYP2C8P10632 490 aa18.43■□□□□ 0.54
SS18L1-202ENST00000370848 PPP4CP60510 307 aa18.43■□□□□ 0.54
SS18L1-202ENST00000370848 METTL16Q86W50 562 aaKnown RBP18.43■□□□□ 0.54
SS18L1-202ENST00000370848 ZSCAN29Q8IWY8 852 aaPredicted RBP18.43■□□□□ 0.54
SS18L1-202ENST00000370848 PROCA1Q8NCQ7 364 aaPredicted RBP18.43■□□□□ 0.54
SS18L1-202ENST00000370848 HERC5Q9UII4 1024 aaKnown RBP18.43■□□□□ 0.54
SS18L1-202ENST00000370848 AGTPBP1Q9UPW5 1226 aa18.43■□□□□ 0.54
SS18L1-202ENST00000370848 MYPNQ86TC9 1320 aa18.43■□□□□ 0.54
SS18L1-202ENST00000370848 GOLIM4O00461 696 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 IGHDP01880 384 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 SLURP2P0DP57 97 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 CAPN2P17655 700 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 GRK4P32298 578 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 FCGRTP55899 365 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 PICALMQ13492 652 aa18.42■□□□□ 0.54
SS18L1-202ENST00000370848 NAA16Q6N069 864 aaPredicted RBP18.42■□□□□ 0.54
SS18L1-202ENST00000370848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
SS18L1-202ENST00000370848 RANBP2P49792 3224 aaKnown RBP18.42■□□□□ 0.54
SS18L1-202ENST00000370848 ATP5JP18859 108 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 IRF5Q13568 498 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 SLC4A8Q2Y0W8 1093 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 SH3D19Q5HYK7 790 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 SLAIN1Q8ND83 568 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 NKX2-3Q8TAU0 364 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
SS18L1-202ENST00000370848 CEP290O15078 2479 aa18.41■□□□□ 0.54
SS18L1-202ENST00000370848 FMNL1O95466 1100 aaPredicted RBP18.4■□□□□ 0.54
SS18L1-202ENST00000370848 GJB1P08034 283 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 CAP2P40123 477 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 GJA8P48165 433 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 PRKCZQ05513 592 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 AAMPQ13685 434 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 MTFR1Q15390 333 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 HABP4Q5JVS0 413 aaKnown RBP18.4■□□□□ 0.54
SS18L1-202ENST00000370848 MAGEB6Q8N7X4 407 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 PXYLP1Q8TE99 480 aa18.4■□□□□ 0.54
SS18L1-202ENST00000370848 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
SS18L1-202ENST00000370848 AATFQ9NY61 560 aaKnown RBP eCLIP18.4■□□□□ 0.54
SS18L1-202ENST00000370848 CYP7A1P22680 504 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 FAM110CQ1W6H9 321 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
SS18L1-202ENST00000370848 RAET1EQ8TD07 263 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 SH3RF3Q8TEJ3 882 aaPredicted RBP18.39■□□□□ 0.53
SS18L1-202ENST00000370848 HAUS7Q99871 368 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.39■□□□□ 0.533e-9■■■■□ 25.5
SS18L1-202ENST00000370848 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
SS18L1-202ENST00000370848 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 CHGBP05060 677 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 PLCG2P16885 1265 aa18.38■□□□□ 0.53
SS18L1-202ENST00000370848 DYNLL1P63167 89 aaKnown RBP18.38■□□□□ 0.53
SS18L1-202ENST00000370848 RRP1BQ14684 758 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms