RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
RPF1-202ENST00000370656 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
RPF1-202ENST00000370656 FAM163AQ96GL9 167 aaPredicted RBP18.61■□□□□ 0.57
RPF1-202ENST00000370656 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
RPF1-202ENST00000370656 ALPK3Q96L96 1907 aa18.61■□□□□ 0.57
RPF1-202ENST00000370656 LAMA3Q16787 3333 aa18.6■□□□□ 0.57
RPF1-202ENST00000370656 DDTLA6NHG4 134 aaPredicted RBP18.6■□□□□ 0.57
RPF1-202ENST00000370656 SOX1O00570 391 aaPredicted RBP18.6■□□□□ 0.57
RPF1-202ENST00000370656 IRX6P78412 446 aaPredicted RBP18.6■□□□□ 0.57
RPF1-202ENST00000370656 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.57
RPF1-202ENST00000370656 CCDC102BQ68D86 513 aa18.6■□□□□ 0.57
RPF1-202ENST00000370656 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
RPF1-202ENST00000370656 PROCA1Q8NCQ7 364 aaPredicted RBP18.6■□□□□ 0.57
RPF1-202ENST00000370656 LRCH3Q96II8 777 aa18.6■□□□□ 0.57
RPF1-202ENST00000370656 CRISPLD2Q9H0B8 497 aa18.6■□□□□ 0.57
RPF1-202ENST00000370656 ATAD5Q96QE3 1844 aa18.59■□□□□ 0.57
RPF1-202ENST00000370656 TBC1D12O60347 775 aa18.59■□□□□ 0.57
RPF1-202ENST00000370656 BTDP43251 543 aa18.59■□□□□ 0.57
RPF1-202ENST00000370656 GCLCP48506 637 aaPredicted RBP18.59■□□□□ 0.57
RPF1-202ENST00000370656 ANKLE1Q8NAG6 615 aa18.59■□□□□ 0.57
RPF1-202ENST00000370656 PAWRQ96IZ0 340 aaKnown RBP18.59■□□□□ 0.57
RPF1-202ENST00000370656 TBC1D2Q9BYX2 928 aa18.59■□□□□ 0.57
RPF1-202ENST00000370656 MROH7-TTC4A0A0A0MT08 1334 aa18.58■□□□□ 0.57
RPF1-202ENST00000370656 RASGRF1Q13972 1273 aa18.58■□□□□ 0.56
RPF1-202ENST00000370656 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.58■□□□□ 0.56
RPF1-202ENST00000370656 OSBPL5Q9H0X9 879 aaPredicted RBP18.58■□□□□ 0.56
RPF1-202ENST00000370656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.58■□□□□ 0.56
RPF1-202ENST00000370656 DDX4Q9NQI0 724 aaKnown RBP18.58■□□□□ 0.56
RPF1-202ENST00000370656 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
RPF1-202ENST00000370656 STAP2Q9UGK3 403 aa18.58■□□□□ 0.56
RPF1-202ENST00000370656 LOC285556D6RIA3 1793 aa18.58■□□□□ 0.56
RPF1-202ENST00000370656 MAP4K4O95819 1239 aaPredicted RBP18.57■□□□□ 0.56
RPF1-202ENST00000370656 HMGCRP04035 888 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 ADORA1P30542 326 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 TREML2Q5T2D2 321 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 ARHGAP45Q92619 1136 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 AKAP2Q9Y2D5 859 aa18.57■□□□□ 0.56
RPF1-202ENST00000370656 LDHCP07864 332 aa18.56■□□□□ 0.56
RPF1-202ENST00000370656 GSTO1P78417 241 aa18.56■□□□□ 0.56
RPF1-202ENST00000370656 MVPQ14764 893 aaKnown RBP18.56■□□□□ 0.56
RPF1-202ENST00000370656 C20orf194Q5TEA3 1177 aa18.56■□□□□ 0.56
RPF1-202ENST00000370656 ZNF280CQ8ND82 737 aa18.56■□□□□ 0.56
RPF1-202ENST00000370656 GPR75-ASB3A0A0A6YYF3 556 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 MS4A1P11836 297 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 BMP8BP34820 402 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 TIMM10P62072 90 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 SPP2Q13103 211 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
RPF1-202ENST00000370656 NBPF3Q9H094 633 aa18.55■□□□□ 0.56
RPF1-202ENST00000370656 HMX1Q9NP08 348 aaPredicted RBP18.55■□□□□ 0.56
RPF1-202ENST00000370656 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.55■□□□□ 0.56
RPF1-202ENST00000370656 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
RPF1-202ENST00000370656 RPTORQ8N122 1335 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 CUL9Q8IWT3 2517 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 MNX1P50219 401 aaPredicted RBP18.54■□□□□ 0.56
RPF1-202ENST00000370656 MECOMQ03112 1051 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 GPR153Q6NV75 609 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 C7orf61Q8IZ16 206 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 EXOC6Q8TAG9 804 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 AS3MTQ9HBK9 375 aa18.54■□□□□ 0.56
RPF1-202ENST00000370656 COL2A1P02458 1487 aaPredicted RBP18.53■□□□□ 0.56
RPF1-202ENST00000370656 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 IPO8O15397 1037 aaKnown RBP18.53■□□□□ 0.56
RPF1-202ENST00000370656 HMGCS2P54868 508 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 RHBDL3P58872 404 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 AAMPQ13685 434 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 DIS3LQ8TF46 1054 aaKnown RBP18.53■□□□□ 0.56
RPF1-202ENST00000370656 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 GDF15Q99988 308 aa18.53■□□□□ 0.56
RPF1-202ENST00000370656 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
RPF1-202ENST00000370656 DDX60LQ5H9U9 1706 aaKnown RBP18.52■□□□□ 0.56
RPF1-202ENST00000370656 FAM196BA6NMK8 535 aa18.52■□□□□ 0.56
RPF1-202ENST00000370656 USP17L5A8MUK1 530 aa18.52■□□□□ 0.56
RPF1-202ENST00000370656 CAP2P40123 477 aa18.52■□□□□ 0.56
RPF1-202ENST00000370656 GORABQ5T7V8 394 aa18.52■□□□□ 0.56
RPF1-202ENST00000370656 CRBNQ96SW2 442 aa18.52■□□□□ 0.56
RPF1-202ENST00000370656 NOL10Q9BSC4 688 aaKnown RBP18.52■□□□□ 0.56
RPF1-202ENST00000370656 ASCC2Q9H1I8 757 aaPredicted RBP18.52■□□□□ 0.56
RPF1-202ENST00000370656 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
RPF1-202ENST00000370656 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
RPF1-202ENST00000370656 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
RPF1-202ENST00000370656 C11orf49Q9H6J7 331 aa18.51■□□□□ 0.55
RPF1-202ENST00000370656 ZMYND8Q9ULU4 1186 aaPredicted RBP18.51■□□□□ 0.55
RPF1-202ENST00000370656 IRX3P78415 501 aaPredicted RBP18.5■□□□□ 0.55
RPF1-202ENST00000370656 TFCP2Q12800 502 aa18.5■□□□□ 0.55
RPF1-202ENST00000370656 SH3D19Q5HYK7 790 aa18.5■□□□□ 0.55
RPF1-202ENST00000370656 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
RPF1-202ENST00000370656 GJD2Q9UKL4 321 aa18.5■□□□□ 0.55
RPF1-202ENST00000370656 NOB1Q9ULX3 412 aaKnown RBP18.5■□□□□ 0.55
RPF1-202ENST00000370656 PLXNB2O15031 1838 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 TRMT44Q8IYL2 757 aaKnown RBP18.49■□□□□ 0.55
RPF1-202ENST00000370656 DEFB123Q8N688 67 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
RPF1-202ENST00000370656 NSUN4Q96CB9 384 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms