RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CDC27P30260 824 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 PTPAQ15257 358 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 OLFM4Q6UX06 510 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
TPM3-209ENST00000368527 LCORLQ8N3X6 602 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
TPM3-209ENST00000368527 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 FTOQ9C0B1 505 aaKnown RBP eCLIP11.78□□□□□ -0.527e-6■■□□□ 12.9
TPM3-209ENST00000368527 OSBPL5Q9H0X9 879 aaPredicted RBP11.78□□□□□ -0.52
TPM3-209ENST00000368527 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 ATP8A2Q9NTI2 1148 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
TPM3-209ENST00000368527 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
TPM3-209ENST00000368527 KIF28PB7ZC32 967 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 ORC4O43929 436 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 PTGS1P23219 599 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 SYCP1Q15431 976 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 C11orf57Q6ZUT1 292 aaPredicted RBP11.77□□□□□ -0.53
TPM3-209ENST00000368527 FBXO33Q7Z6M2 555 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 CATIPQ7Z7H3 387 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 FANCBQ8NB91 859 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 ACSBG1Q96GR2 724 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 MAP3K14Q99558 947 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 CRNKL1Q9BZJ0 848 aaKnown RBP11.77□□□□□ -0.53
TPM3-209ENST00000368527 TOMM22Q9NS69 142 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 CHD4Q14839 1912 aa11.77□□□□□ -0.53
TPM3-209ENST00000368527 DUOX1Q9NRD9 1551 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 RPS8P62241 208 aaKnown RBP11.76□□□□□ -0.53
TPM3-209ENST00000368527 CTDSPL2Q05D32 466 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 LRRC8AQ8IWT6 810 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 ZNF830Q96NB3 372 aaPredicted RBP11.76□□□□□ -0.53
TPM3-209ENST00000368527 SETDB2Q96T68 719 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
TPM3-209ENST00000368527 ARPP21Q9UBL0 812 aaPredicted RBP11.76□□□□□ -0.53
TPM3-209ENST00000368527 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
TPM3-209ENST00000368527 A0A0G2JS52 829 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
TPM3-209ENST00000368527 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
TPM3-209ENST00000368527 ZPR1O75312 459 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 PTPREP23469 700 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 GSTO1P78417 241 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 MYL5Q02045 173 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 SEC23AQ15436 765 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 DIS3L2Q8IYB7 885 aaKnown RBP11.75□□□□□ -0.53
TPM3-209ENST00000368527 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 PHKBQ93100 1093 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 FERMT2Q96AC1 680 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
TPM3-209ENST00000368527 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
TPM3-209ENST00000368527 COL24A1Q17RW2 1714 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 MAST2Q6P0Q8 1798 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 SMC2O95347 1197 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 HIBADHP31937 336 aaKnown RBP11.74□□□□□ -0.53
TPM3-209ENST00000368527 KIF5BP33176 963 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 TRAPPC10P48553 1259 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 PDE4BQ07343 736 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 RRP12Q5JTH9 1297 aaKnown RBP11.74□□□□□ -0.53
TPM3-209ENST00000368527 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
TPM3-209ENST00000368527 KRBA2Q6ZNG9 492 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 AMOTL1Q8IY63 956 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 MLKLQ8NB16 471 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 LINC00116Q8NCU8 138 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 CNNM3Q8NE01 707 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 FAM84BQ96KN1 310 aaPredicted RBP11.74□□□□□ -0.53
TPM3-209ENST00000368527 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 SRPRBQ9Y5M8 271 aaKnown RBP11.74□□□□□ -0.53
TPM3-209ENST00000368527 TNKSO95271 1327 aa11.74□□□□□ -0.53
TPM3-209ENST00000368527 A0A1B0GUL6 1792 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 PRKAB2O43741 272 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
TPM3-209ENST00000368527 KRT2P35908 639 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 GNAQP50148 359 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
TPM3-209ENST00000368527 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
TPM3-209ENST00000368527 CTCFLQ8NI51 663 aaPredicted RBP11.73□□□□□ -0.53
TPM3-209ENST00000368527 WDR66Q8TBY9 1149 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 ZNF287Q9HBT7 754 aa11.73□□□□□ -0.53
TPM3-209ENST00000368527 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 MINDY4BA8MYZ0 360 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 LDHCP07864 332 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 CALML3P27482 149 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 DPCR1Q3MIW9 517 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms