RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NEFLP07196 543 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 ERVK-24P63145 666 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 DBX2Q6ZNG2 339 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 NPAS4Q8IUM7 802 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 CCDC120Q96HB5 630 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 FOXQ1Q9C009 403 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 PARD6AQ9NPB6 346 aa6.5□□□□□ -1.37
ECHDC1-201ENST00000368287 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 SF3B2Q13435 895 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 RETREG2Q8NC44 543 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 ABHD4Q8TB40 342 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 KCNN1Q92952 543 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 SLC26A8Q96RN1 970 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 ZCCHC4Q9H5U6 513 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 ATP13A1Q9HD20 1204 aa6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 PRDM5Q9NQX1 630 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-201ENST00000368287 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 RAC2P15153 192 aa6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 GPN3Q9UHW5 284 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-201ENST00000368287 FAM155AB1AL88 458 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 FKBP4Q02790 459 aaKnown RBP eCLIP6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 PDZD3Q86UT5 571 aa6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 SEMA3GQ9NS98 782 aa6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 MAPK8IP1Q9UQF2 711 aa6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 MTMR7Q9Y216 660 aa6.47□□□□□ -1.37
ECHDC1-201ENST00000368287 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 EOMESO95936 686 aa6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 BMP7P18075 431 aa6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 TMEM39AQ9NV64 488 aa6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
ECHDC1-201ENST00000368287 H3BS24 57 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 CPNE3O75131 537 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 SYN1P17600 705 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 SSFA2P28290 1259 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 CDKAL1Q5VV42 579 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 MAP1SQ66K74 1059 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 ALPK1Q96QP1 1244 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 USTQ9Y2C2 406 aa6.45□□□□□ -1.38
ECHDC1-201ENST00000368287 A0A0G2JLL6 359 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 ABL1P00519 1130 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 ORC1Q13415 861 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 TTC6Q86TZ1 520 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 ACSBG1Q96GR2 724 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 ANO2Q9NQ90 1003 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 SLAMF8Q9P0V8 285 aa6.44□□□□□ -1.38
ECHDC1-201ENST00000368287 SRFP11831 508 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 DTHD1Q6ZMT9 781 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 UBE3DQ7Z6J8 389 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 MFSD4AQ8N468 514 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 GPBAR1Q8TDU6 330 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 BRPF3Q9ULD4 1205 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 CSADQ9Y600 493 aa6.43□□□□□ -1.38
ECHDC1-201ENST00000368287 PRR33A8MZF0 331 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 NFIXQ14938 502 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 B4GALNT3Q6L9W6 998 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 CDC37L1Q7L3B6 337 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 STK35Q8TDR2 534 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 MYLIPQ8WY64 445 aa6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 TPX2Q9ULW0 747 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-201ENST00000368287 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 ARNTP27540 789 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 NTF4P34130 210 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 GRM2Q14416 872 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 ARMCX6Q7L4S7 300 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 CCDC74AQ96AQ1 378 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 EMILIN2Q9BXX0 1053 aa6.41□□□□□ -1.38
ECHDC1-201ENST00000368287 PDIA4P13667 645 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-201ENST00000368287 FGD1P98174 961 aa6.4□□□□□ -1.38
ECHDC1-201ENST00000368287 TRIM26Q12899 539 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-201ENST00000368287 SFRP5Q5T4F7 317 aa6.4□□□□□ -1.38
ECHDC1-201ENST00000368287 THAP5Q7Z6K1 395 aa6.4□□□□□ -1.38
ECHDC1-201ENST00000368287 DCDC2CA8MYV0 355 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 FANCGO15287 622 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 LRIG2O94898 1065 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 FCGRTP55899 365 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 ERVFC1P60507 584 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 C22orf34Q6ZV56 151 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 KCT2Q8NC54 265 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 BAHD1Q8TBE0 780 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 TRAIPQ9BWF2 469 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 CBX8Q9HC52 389 aa6.39□□□□□ -1.39
ECHDC1-201ENST00000368287 DNAJC25-GNG10A0A024R161 153 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 SLITRK5O94991 958 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 NME2P22392 152 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 HK2P52789 917 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 PDE3BQ13370 1112 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 ZBTB37Q5TC79 503 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 TCERG1LQ5VWI1 586 aa6.38□□□□□ -1.39
ECHDC1-201ENST00000368287 C12orf40Q86WS4 652 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms