RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 SUPT16HQ9Y5B9 1047 aaKnown RBP28.96■■■□□ 2.23
PFDN2-201ENST00000368010 CDK5RAP2Q96SN8 1893 aa28.95■■■□□ 2.23
PFDN2-201ENST00000368010 HLA-DOAP06340 250 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 ADD2P35612 726 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 CRHR2Q13324 411 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 DGKZQ13574 1117 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 FAM43AQ8N2R8 423 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 ZHX2Q9Y6X8 837 aa28.95■■■□□ 2.22
PFDN2-201ENST00000368010 FKTNO75072 461 aa28.94■■■□□ 2.22
PFDN2-201ENST00000368010 PTPRAP18433 802 aa28.94■■■□□ 2.22
PFDN2-201ENST00000368010 FOXP4Q8IVH2 680 aaPredicted RBP28.94■■■□□ 2.22
PFDN2-201ENST00000368010 CRACR2BQ8N4Y2 399 aaPredicted RBP28.94■■■□□ 2.22
PFDN2-201ENST00000368010 GCC1Q96CN9 775 aa28.94■■■□□ 2.22
PFDN2-201ENST00000368010 TRIM34Q9BYJ4 488 aa28.94■■■□□ 2.22
PFDN2-201ENST00000368010 DOCK1Q14185 1865 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 CXCL11O14625 94 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 TAF1CQ15572 869 aaPredicted RBP28.93■■■□□ 2.22
PFDN2-201ENST00000368010 TSHZ3Q63HK5 1081 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 ZSCAN25Q6NSZ9 544 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 CRNKL1Q9BZJ0 848 aaKnown RBP28.93■■■□□ 2.22
PFDN2-201ENST00000368010 MCOLN1Q9GZU1 580 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 ZCCHC17Q9NP64 241 aaKnown RBP28.93■■■□□ 2.22
PFDN2-201ENST00000368010 TTC41PQ6P2S7 1318 aa28.93■■■□□ 2.22
PFDN2-201ENST00000368010 CTU1Q7Z7A3 348 aaKnown RBP28.92■■■□□ 2.22
PFDN2-201ENST00000368010 EXOC6Q8TAG9 804 aa28.92■■■□□ 2.22
PFDN2-201ENST00000368010 BTBD19C9JJ37 291 aa28.91■■■□□ 2.22
PFDN2-201ENST00000368010 CAP2P40123 477 aa28.91■■■□□ 2.22
PFDN2-201ENST00000368010 ANKRD45Q5TZF3 282 aa28.91■■■□□ 2.22
PFDN2-201ENST00000368010 METTL16Q86W50 562 aaKnown RBP28.91■■■□□ 2.22
PFDN2-201ENST00000368010 ABHD8Q96I13 439 aa28.91■■■□□ 2.22
PFDN2-201ENST00000368010 ZFYVE28Q9HCC9 887 aa28.91■■■□□ 2.22
PFDN2-201ENST00000368010 SIPA1L1O43166 1804 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 ERC2O15083 957 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 CAPN15O75808 1086 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 UBE3CQ15386 1083 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 SLC4A8Q2Y0W8 1093 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 LCORLQ8N3X6 602 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 AFG3L2Q9Y4W6 797 aa28.9■■■□□ 2.22
PFDN2-201ENST00000368010 ANKRD23Q86SG2 305 aa28.89■■■□□ 2.22
PFDN2-201ENST00000368010 TTC6Q86TZ1 520 aa28.89■■■□□ 2.22
PFDN2-201ENST00000368010 OTUD7AQ8TE49 926 aaPredicted RBP28.89■■■□□ 2.22
PFDN2-201ENST00000368010 DNAJC18Q9H819 358 aa28.89■■■□□ 2.22
PFDN2-201ENST00000368010 ARMT1Q9H993 441 aa28.89■■■□□ 2.22
PFDN2-201ENST00000368010 RRP1BQ14684 758 aaKnown RBP28.88■■■□□ 2.21
PFDN2-201ENST00000368010 SLFNL1Q499Z3 407 aa28.88■■■□□ 2.21
PFDN2-201ENST00000368010 KBTBD3Q8NAB2 608 aa28.88■■■□□ 2.21
PFDN2-201ENST00000368010 RWDD1Q9H446 243 aaPredicted RBP28.88■■■□□ 2.21
PFDN2-201ENST00000368010 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.88■■■□□ 2.21
PFDN2-201ENST00000368010 GLRX3O76003 335 aaKnown RBP28.87■■■□□ 2.21
PFDN2-201ENST00000368010 MBD4O95243 580 aa28.87■■■□□ 2.21
PFDN2-201ENST00000368010 MX1P20591 662 aa28.87■■■□□ 2.21
PFDN2-201ENST00000368010 CCDC84Q86UT8 332 aaPredicted RBP28.87■■■□□ 2.21
PFDN2-201ENST00000368010 EHD4Q9H223 541 aa28.87■■■□□ 2.21
PFDN2-201ENST00000368010 A0A0G2JLL6 359 aaPredicted RBP28.86■■■□□ 2.21
PFDN2-201ENST00000368010 TRIM75PA6NK02 468 aa28.86■■■□□ 2.21
PFDN2-201ENST00000368010 MOGSQ13724 837 aa28.86■■■□□ 2.21
PFDN2-201ENST00000368010 FASTKD5Q7L8L6 764 aaKnown RBP28.86■■■□□ 2.21
PFDN2-201ENST00000368010 PRRT2Q7Z6L0 340 aaPredicted RBP28.86■■■□□ 2.21
PFDN2-201ENST00000368010 SDR42E1Q8WUS8 393 aa28.86■■■□□ 2.21
PFDN2-201ENST00000368010 TBC1D2Q9BYX2 928 aa28.86■■■□□ 2.21
PFDN2-201ENST00000368010 SERPINB13Q9UIV8 391 aa28.86■■■□□ 2.21
PFDN2-201ENST00000368010 MYH1P12882 1939 aa28.85■■■□□ 2.21
PFDN2-201ENST00000368010 PDHXO00330 501 aa28.85■■■□□ 2.21
PFDN2-201ENST00000368010 CHGBP05060 677 aa28.85■■■□□ 2.21
PFDN2-201ENST00000368010 ASNSP08243 561 aa28.85■■■□□ 2.21
PFDN2-201ENST00000368010 PI4K2BQ8TCG2 481 aa28.85■■■□□ 2.21
PFDN2-201ENST00000368010 POLR3DP05423 398 aaPredicted RBP28.84■■■□□ 2.21
PFDN2-201ENST00000368010 SP3Q02447 781 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 ERO1AQ96HE7 468 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 DCP1AQ9NPI6 582 aaPredicted RBP28.84■■■□□ 2.21
PFDN2-201ENST00000368010 GINM1Q9NU53 330 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 MCM9Q9NXL9 1143 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 NAV1Q8NEY1 1877 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 MYH7P12883 1935 aa28.84■■■□□ 2.21
PFDN2-201ENST00000368010 DDX60LQ5H9U9 1706 aaKnown RBP28.83■■■□□ 2.21
PFDN2-201ENST00000368010 USP17L5A8MUK1 530 aa28.83■■■□□ 2.21
PFDN2-201ENST00000368010 PKN2Q16513 984 aaKnown RBP28.83■■■□□ 2.21
PFDN2-201ENST00000368010 ZNF280CQ8ND82 737 aa28.83■■■□□ 2.21
PFDN2-201ENST00000368010 AS3MTQ9HBK9 375 aa28.83■■■□□ 2.21
PFDN2-201ENST00000368010 SALL3Q9BXA9 1300 aa28.83■■■□□ 2.21
PFDN2-201ENST00000368010 TLR2O60603 784 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 GDF11O95390 407 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 SPP2Q13103 211 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 LRRFIP1Q32MZ4 808 aaKnown RBP28.82■■■□□ 2.2
PFDN2-201ENST00000368010 GPAT2Q6NUI2 795 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 GADL1Q6ZQY3 521 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 SMC5Q8IY18 1101 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 ATAD5Q96QE3 1844 aa28.82■■■□□ 2.2
PFDN2-201ENST00000368010 PHIPQ8WWQ0 1821 aa28.81■■■□□ 2.2
PFDN2-201ENST00000368010 PRKAB2O43741 272 aa28.81■■■□□ 2.2
PFDN2-201ENST00000368010 ZFYP08048 801 aaPredicted RBP28.81■■■□□ 2.2
PFDN2-201ENST00000368010 PLCD1P51178 756 aa28.81■■■□□ 2.2
PFDN2-201ENST00000368010 PUS7LQ9H0K6 701 aaKnown RBP28.81■■■□□ 2.2
PFDN2-201ENST00000368010 ATP8A2Q9NTI2 1148 aa28.81■■■□□ 2.2
PFDN2-201ENST00000368010 ZBTB21Q9ULJ3 1066 aa28.81■■■□□ 2.2
PFDN2-201ENST00000368010 TATDN1Q6P1N9 297 aa28.8■■■□□ 2.2
PFDN2-201ENST00000368010 CD99L2Q8TCZ2 262 aa28.8■■■□□ 2.2
PFDN2-201ENST00000368010 APPBP2Q92624 585 aa28.8■■■□□ 2.2
PFDN2-201ENST00000368010 DDRGK1Q96HY6 314 aa28.8■■■□□ 2.2
PFDN2-201ENST00000368010 PARK7Q99497 189 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms