RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 AP3B2Q13367 1082 aa6.72□□□□□ -1.33
XCL1-201ENST00000367818 ELOAQ14241 798 aaKnown RBP6.72□□□□□ -1.33
XCL1-201ENST00000367818 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
XCL1-201ENST00000367818 PCOLCE2Q9UKZ9 415 aa6.72□□□□□ -1.33
XCL1-201ENST00000367818 RNGTTO60942 597 aaKnown RBP6.71□□□□□ -1.33
XCL1-201ENST00000367818 LIG1P18858 919 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 CLCN7P51798 805 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 TTLL4Q14679 1199 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 NFIXQ14938 502 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 NOM1Q5C9Z4 860 aaKnown RBP6.71□□□□□ -1.33
XCL1-201ENST00000367818 GGNQ86UU5 652 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 DISC1Q9NRI5 854 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 GTF2IRD1Q9UHL9 959 aa6.71□□□□□ -1.33
XCL1-201ENST00000367818 PRG4Q92954 1404 aaPredicted RBP6.71□□□□□ -1.33
XCL1-201ENST00000367818 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
XCL1-201ENST00000367818 BMP7P18075 431 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 WDR89Q96FK6 387 aaPredicted RBP6.7□□□□□ -1.34
XCL1-201ENST00000367818 BORCS6Q96GS4 357 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 SLC26A8Q96RN1 970 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 TCF12Q99081 682 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 CARS2Q9HA77 564 aaKnown RBP6.7□□□□□ -1.34
XCL1-201ENST00000367818 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 SEPT3Q9UH03 358 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 NUP160Q12769 1436 aa6.7□□□□□ -1.34
XCL1-201ENST00000367818 IGF2BP3O00425 579 aaKnown RBP eCLIP6.69□□□□□ -1.34
XCL1-201ENST00000367818 SLFN14P0C7P3 912 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 HELQQ8TDG4 1101 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 ZNF576Q9H609 170 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
XCL1-201ENST00000367818 PCDHGC5Q9Y5F6 944 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 ERICH3Q5RHP9 1530 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 PSPNO60542 156 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 SRFP11831 508 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 HNRNPUQ00839 825 aaKnown RBP eCLIP6.69□□□□□ -1.34
XCL1-201ENST00000367818 EHHADHQ08426 723 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 FAM214BQ7L5A3 538 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 PRRT2Q7Z6L0 340 aaPredicted RBP6.69□□□□□ -1.34
XCL1-201ENST00000367818 TMPRSS5Q9H3S3 457 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 RTEL1Q9NZ71 1219 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 POLIQ9UNA4 740 aa6.69□□□□□ -1.34
XCL1-201ENST00000367818 EIF1AXP47813 144 aaKnown RBP6.68□□□□□ -1.34
XCL1-201ENST00000367818 NFKB2Q00653 900 aa6.68□□□□□ -1.34
XCL1-201ENST00000367818 KIF4BQ2VIQ3 1234 aa6.68□□□□□ -1.34
XCL1-201ENST00000367818 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
XCL1-201ENST00000367818 A0A1W2PP55 124 aa6.67□□□□□ -1.34
XCL1-201ENST00000367818 NEFMP07197 916 aa6.67□□□□□ -1.34
XCL1-201ENST00000367818 KCNN1Q92952 543 aa6.67□□□□□ -1.34
XCL1-201ENST00000367818 CLP1Q92989 425 aaKnown RBP6.67□□□□□ -1.34
XCL1-201ENST00000367818 KIF27Q86VH2 1401 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 ZNF862O60290 1169 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
XCL1-201ENST00000367818 SKOR2Q2VWA4 1001 aaPredicted RBP6.66□□□□□ -1.34
XCL1-201ENST00000367818 CXorf38Q8TB03 319 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 ISL2Q96A47 359 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 CCDC120Q96HB5 630 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 ZFYVE28Q9HCC9 887 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 SHROOM2Q13796 1616 aa6.66□□□□□ -1.34
XCL1-201ENST00000367818 RUSC2Q8N2Y8 1516 aa6.65□□□□□ -1.34
XCL1-201ENST00000367818 MPSTP25325 297 aa6.65□□□□□ -1.35
XCL1-201ENST00000367818 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.65□□□□□ -1.35
XCL1-201ENST00000367818 SSU72Q9NP77 194 aaKnown RBP6.65□□□□□ -1.35
XCL1-201ENST00000367818 KRT82Q9NSB4 513 aa6.65□□□□□ -1.35
XCL1-201ENST00000367818 CNTNAP4Q9C0A0 1308 aa6.65□□□□□ -1.35
XCL1-201ENST00000367818 CARMIL1Q5VZK9 1371 aa6.65□□□□□ -1.35
XCL1-201ENST00000367818 ITPKAP23677 461 aa6.64□□□□□ -1.35
XCL1-201ENST00000367818 ALKBH2Q6NS38 261 aa6.64□□□□□ -1.35
XCL1-201ENST00000367818 NPAS4Q8IUM7 802 aa6.64□□□□□ -1.35
XCL1-201ENST00000367818 ABHD4Q8TB40 342 aa6.64□□□□□ -1.35
XCL1-201ENST00000367818 ZC3H12CQ9C0D7 883 aaKnown RBP6.64□□□□□ -1.35
XCL1-201ENST00000367818 ADRB1P08588 477 aa6.63□□□□□ -1.35
XCL1-201ENST00000367818 RAC2P15153 192 aa6.63□□□□□ -1.35
XCL1-201ENST00000367818 USP5P45974 858 aa6.63□□□□□ -1.35
XCL1-201ENST00000367818 GALNT12Q8IXK2 581 aa6.63□□□□□ -1.35
XCL1-201ENST00000367818 TSPOAP1O95153 1857 aa6.62□□□□□ -1.35
XCL1-201ENST00000367818 RANGAP1P46060 587 aaPredicted RBP6.62□□□□□ -1.35
XCL1-201ENST00000367818 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
XCL1-201ENST00000367818 ATP13A1Q9HD20 1204 aa6.62□□□□□ -1.35
XCL1-201ENST00000367818 PRDM10Q9NQV6 1147 aa6.62□□□□□ -1.35
XCL1-201ENST00000367818 KIAA0586Q9BVV6 1533 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
XCL1-201ENST00000367818 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 SEMA3GQ9NS98 782 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 KIF13AQ9H1H9 1805 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 CUL7Q14999 1698 aa6.61□□□□□ -1.35
XCL1-201ENST00000367818 PTPRGP23470 1445 aa6.6□□□□□ -1.35
XCL1-201ENST00000367818 TRIM13O60858 407 aa6.6□□□□□ -1.35
XCL1-201ENST00000367818 KRTAP1-1Q07627 177 aa6.6□□□□□ -1.35
XCL1-201ENST00000367818 FAM9AQ8IZU1 332 aaPredicted RBP6.6□□□□□ -1.35
XCL1-201ENST00000367818 BAHD1Q8TBE0 780 aaPredicted RBP6.6□□□□□ -1.35
XCL1-201ENST00000367818 ADCY10Q96PN6 1610 aa6.6□□□□□ -1.35
XCL1-201ENST00000367818 GSTP1P09211 210 aaKnown RBP6.59□□□□□ -1.35
XCL1-201ENST00000367818 ATP2B4P23634 1241 aa6.59□□□□□ -1.35
XCL1-201ENST00000367818 PTPN12Q05209 780 aaKnown RBP6.59□□□□□ -1.35
XCL1-201ENST00000367818 TCERG1LQ5VWI1 586 aa6.59□□□□□ -1.35
XCL1-201ENST00000367818 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms