RNA–Protein interactions for RNA: ENST00000366985.5

ATF3-205, Transcript of activating transcription factor 3, humanhuman

TSL 5

Gene ATF3, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-205ENST00000366985 DNAAF4Q8WXU2 420 aa9.58□□□□□ -0.88
ATF3-205ENST00000366985 UHRF1Q96T88 793 aaPredicted RBP9.58□□□□□ -0.88
ATF3-205ENST00000366985 ATP11BQ9Y2G3 1177 aa9.58□□□□□ -0.88
ATF3-205ENST00000366985 MAST2Q6P0Q8 1798 aa9.58□□□□□ -0.88
ATF3-205ENST00000366985 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
ATF3-205ENST00000366985 KBTBD13C9JR72 458 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 IFIT1P09914 478 aaKnown RBP9.57□□□□□ -0.88
ATF3-205ENST00000366985 CNGA1P29973 690 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 MAPK4P31152 587 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 FOXK2Q01167 660 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 SHHQ15465 462 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 APOBEC3HQ6NTF7 200 aaKnown RBP9.57□□□□□ -0.88
ATF3-205ENST00000366985 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 ADAMTS19Q8TE59 1207 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 TRIB2Q92519 343 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
ATF3-205ENST00000366985 AS3MTQ9HBK9 375 aa9.57□□□□□ -0.88
ATF3-205ENST00000366985 C9orf78Q9NZ63 289 aaPredicted RBP9.57□□□□□ -0.88
ATF3-205ENST00000366985 ATN1P54259 1190 aaPredicted RBP9.56□□□□□ -0.88
ATF3-205ENST00000366985 RTP1P59025 263 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 AAK1Q2M2I8 961 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 MAP3K21Q5TCX8 1036 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 C8orf58Q8NAV2 365 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 ARRDC4Q8NCT1 418 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 GTF3C2Q8WUA4 911 aaPredicted RBP9.56□□□□□ -0.88
ATF3-205ENST00000366985 PPM1EQ8WY54 764 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
ATF3-205ENST00000366985 ASB2Q96Q27 587 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 USP40Q9NVE5 1235 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 TMOD4Q9NZQ9 345 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 PTPRFP10586 1907 aa9.56□□□□□ -0.88
ATF3-205ENST00000366985 DNM1LO00429 736 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 ENTPD3O75355 529 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 LDHBP07195 334 aaKnown RBP9.55□□□□□ -0.88
ATF3-205ENST00000366985 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 CACNB2Q08289 660 aaPredicted RBP9.55□□□□□ -0.88
ATF3-205ENST00000366985 FLIIQ13045 1269 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 TRIM32Q13049 653 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 CCDC174Q6PII3 467 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 GPRC5AQ8NFJ5 357 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 APBA2Q99767 749 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 GNL3LQ9NVN8 582 aaKnown RBP9.55□□□□□ -0.88
ATF3-205ENST00000366985 GJD2Q9UKL4 321 aa9.55□□□□□ -0.88
ATF3-205ENST00000366985 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.54□□□□□ -0.88
ATF3-205ENST00000366985 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.54□□□□□ -0.88
ATF3-205ENST00000366985 CASP7P55210 303 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 CCNA1P78396 465 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 FOXO4P98177 505 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 CDC42EP5Q6NZY7 148 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 ZGPATQ8N5A5 531 aaKnown RBP9.54□□□□□ -0.88
ATF3-205ENST00000366985 LRFN3Q9BTN0 628 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 ASCC2Q9H1I8 757 aaPredicted RBP9.54□□□□□ -0.88
ATF3-205ENST00000366985 TTYH1Q9H313 450 aaPredicted RBP9.54□□□□□ -0.88
ATF3-205ENST00000366985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.54□□□□□ -0.88
ATF3-205ENST00000366985 IVNS1ABPQ9Y6Y0 642 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 ATRXP46100 2492 aa9.54□□□□□ -0.88
ATF3-205ENST00000366985 DOCK3Q8IZD9 2030 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 SPDYE4A6NLX3 237 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 KRT37O76014 449 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 SLC5A1P13866 664 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 HMGCS2P54868 508 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 ATP2B2Q01814 1243 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 TWISTNBQ3B726 338 aaPredicted RBP9.53□□□□□ -0.88
ATF3-205ENST00000366985 AKNAD1Q5T1N1 836 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 TREML2Q5T2D2 321 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 PLEKHH3Q7Z736 793 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 LPAR1Q92633 364 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 BADQ92934 168 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 OSBPL5Q9H0X9 879 aaPredicted RBP9.53□□□□□ -0.88
ATF3-205ENST00000366985 ZNF576Q9H609 170 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 MORF4L1Q9UBU8 362 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 FRMPD3Q5JV73 1810 aa9.53□□□□□ -0.88
ATF3-205ENST00000366985 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.88
ATF3-205ENST00000366985 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 GRM8O00222 908 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 DNAJB2P25686 324 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 CCND3P30281 292 aaPredicted RBP9.52□□□□□ -0.89
ATF3-205ENST00000366985 RGS3P49796 1198 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
ATF3-205ENST00000366985 SPP2Q13103 211 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 GRIK5Q16478 980 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 C9orf50Q5SZB4 431 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 WDR78Q5VTH9 848 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 LHX8Q68G74 356 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 CCDC129Q6ZRS4 1044 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 EDC3Q96F86 508 aaKnown RBP9.52□□□□□ -0.89
ATF3-205ENST00000366985 TRIM34Q9BYJ4 488 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 IGSF5Q9NSI5 407 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 DDX20Q9UHI6 824 aaKnown RBP9.52□□□□□ -0.89
ATF3-205ENST00000366985 TACC3Q9Y6A5 838 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 KIF16BQ96L93 1317 aa9.52□□□□□ -0.89
ATF3-205ENST00000366985 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms