RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZMYM6O95789 1325 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 TEX33O43247 280 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 SLC9C2Q5TAH2 1124 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 CHMP4CQ96CF2 233 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 MPHOSPH8Q99549 860 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 NRAPQ86VF7 1730 aa15.56■□□□□ 0.08
PRKN-205ENST00000366897 IARSP41252 1262 aaKnown RBP15.55■□□□□ 0.08
PRKN-205ENST00000366897 LMAN1P49257 510 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 MCM6Q14566 821 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 SPECC1LQ69YQ0 1117 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 FBXL16Q8N461 479 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.55■□□□□ 0.086e-17■■■■■ 149.9
PRKN-205ENST00000366897 FUT8Q9BYC5 575 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 CAMTA1Q9Y6Y1 1673 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 GOLGA8AA7E2F4 631 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 PPP6R2O75170 966 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 TBX2Q13207 712 aaPredicted RBP15.55■□□□□ 0.08
PRKN-205ENST00000366897 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
PRKN-205ENST00000366897 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 UBN2Q6ZU65 1347 aa15.55■□□□□ 0.08
PRKN-205ENST00000366897 SH2B2O14492 632 aaPredicted RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 TUBB4AP04350 444 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 MCAMP43121 646 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 EVA1CP58658 441 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 TRIM29Q14134 588 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 LONRF2Q1L5Z9 754 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 RSRC2Q7L4I2 434 aaKnown RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 GPR161Q8N6U8 529 aaKnown RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 LCMT1Q9UIC8 334 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 ZBTB43O43298 467 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 NR5A1Q13285 461 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 POSTNQ15063 836 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 FAM98CQ17RN3 349 aaKnown RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 FAM217BQ9NTX9 383 aaPredicted RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 TULP2O00295 520 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 ABL1P00519 1130 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 TOB1P50616 345 aaPredicted RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 RRP12Q5JTH9 1297 aaKnown RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 SMYD4Q8IYR2 804 aaPredicted RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 KRI1Q8N9T8 703 aaKnown RBP15.54■□□□□ 0.08
PRKN-205ENST00000366897 UBXN6Q9BZV1 441 aa15.54■□□□□ 0.08
PRKN-205ENST00000366897 ARFGEF2Q9Y6D5 1785 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 CUTAO60888 179 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 CTDSPL2Q05D32 466 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 TMEM67Q5HYA8 995 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 RAD9BQ6WBX8 426 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 TOMM22Q9NS69 142 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 TRIM66O15016 1216 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 STX10O60499 249 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 N4BP1O75113 896 aaKnown RBP15.53■□□□□ 0.08
PRKN-205ENST00000366897 MDM2Q00987 491 aaPredicted RBP15.53■□□□□ 0.08
PRKN-205ENST00000366897 DHX8Q14562 1220 aaKnown RBP15.53■□□□□ 0.08
PRKN-205ENST00000366897 NTRK3Q16288 839 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
PRKN-205ENST00000366897 PIH1D3Q9NQM4 214 aaKnown RBP15.53■□□□□ 0.08
PRKN-205ENST00000366897 PCDHB6Q9Y5E3 794 aa15.53■□□□□ 0.08
PRKN-205ENST00000366897 ZFYP08048 801 aaPredicted RBP15.52■□□□□ 0.08
PRKN-205ENST00000366897 AFMP43652 599 aa15.52■□□□□ 0.08
PRKN-205ENST00000366897 ZSCAN26Q16670 478 aa15.52■□□□□ 0.08
PRKN-205ENST00000366897 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.08
PRKN-205ENST00000366897 GOLGA1Q92805 767 aa15.52■□□□□ 0.08
PRKN-205ENST00000366897 RAI14Q9P0K7 980 aa15.52■□□□□ 0.08
PRKN-205ENST00000366897 A0A0G2JS52 829 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 RHOXF2BP0C7M4 288 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 CPLX2Q6PUV4 134 aaKnown RBP15.52■□□□□ 0.07
PRKN-205ENST00000366897 FCHSD1Q86WN1 690 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 DIS3L2Q8IYB7 885 aaKnown RBP15.52■□□□□ 0.07
PRKN-205ENST00000366897 STAMQ92783 540 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 PDE11AQ9HCR9 933 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 FEZ2Q9UHY8 353 aaPredicted RBP15.52■□□□□ 0.07
PRKN-205ENST00000366897 ADAM21Q9UKJ8 722 aa15.52■□□□□ 0.07
PRKN-205ENST00000366897 FAM205CA6NFA0 338 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 ZNF18P17022 549 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 METTL24Q5JXM2 366 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 CREBRFQ8IUR6 639 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 OXER1Q8TDS5 423 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 PNKPQ96T60 521 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 WWC3Q9ULE0 1092 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 SPATA31A1Q5TZJ5 1347 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 SNAP23O00161 211 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 PHACTR2O75167 634 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 TPM1P09493 284 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 GPTP24298 496 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 RBL2Q08999 1139 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 NOSTRINQ8IVI9 506 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 RABGGTAQ92696 567 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
PRKN-205ENST00000366897 VPS18Q9P253 973 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 TACC3Q9Y6A5 838 aa15.51■□□□□ 0.07
PRKN-205ENST00000366897 IFIT3O14879 490 aaKnown RBP15.5■□□□□ 0.07
PRKN-205ENST00000366897 CDKL5O76039 1030 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms