RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
PRKN-204ENST00000366896 ERCC6LQ2NKX8 1250 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 ITGA6P23229 1130 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 SLC16A10Q8TF71 515 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
PRKN-204ENST00000366896 FHOD1Q9Y613 1164 aa16.95■□□□□ 0.3
PRKN-204ENST00000366896 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
PRKN-204ENST00000366896 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 CMA1P23946 247 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 ST5P78524 1137 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 PPP1R13BQ96KQ4 1090 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 NLRP3Q96P20 1036 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 CYP2C19P33261 490 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
PRKN-204ENST00000366896 AIFM3Q96NN9 605 aa16.94■□□□□ 0.3
PRKN-204ENST00000366896 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRKN-204ENST00000366896 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 BIN1O00499 593 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 ZNF213O14771 459 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 CPLX1O14810 134 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 TUBB4AP04350 444 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 MCAMP43121 646 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 CLCN6P51797 869 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 KIF23Q02241 960 aaPredicted RBP16.93■□□□□ 0.3
PRKN-204ENST00000366896 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
PRKN-204ENST00000366896 AXDND1Q5T1B0 1012 aaPredicted RBP16.93■□□□□ 0.3
PRKN-204ENST00000366896 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 CCDC150Q8NCX0 1101 aa16.93■□□□□ 0.3
PRKN-204ENST00000366896 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 FAM237AA0A1B0GTK4 181 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 TULP2O00295 520 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 NLRP12P59046 1061 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 SYT10Q6XYQ8 523 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 TBC1D10CQ8IV04 446 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 TAOK2Q9UL54 1235 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 LRP5O75197 1615 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 COL4A1P02462 1669 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 IKBKBO14920 756 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 CDKL5O76039 1030 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 TPM4P67936 248 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 SLC39A14Q15043 492 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
PRKN-204ENST00000366896 LRRN4CLQ8ND94 238 aa16.92■□□□□ 0.3
PRKN-204ENST00000366896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKN-204ENST00000366896 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 MYH7P12883 1935 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 PPP6R2O75170 966 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
PRKN-204ENST00000366896 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
PRKN-204ENST00000366896 PFKFB1P16118 471 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 RXRAP19793 462 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 SLC20A2Q08357 652 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
PRKN-204ENST00000366896 METTL24Q5JXM2 366 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 CYB5R4Q7L1T6 521 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 RIPOR2Q9Y4F9 1068 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
PRKN-204ENST00000366896 ZNF202O95125 648 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 ADD2P35612 726 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 UBE3CQ15386 1083 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 SENP2Q9HC62 589 aa16.91■□□□□ 0.3
PRKN-204ENST00000366896 ANGEL1Q9UNK9 670 aaKnown RBP16.91■□□□□ 0.3
PRKN-204ENST00000366896 MYO1BO43795 1136 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 MARCKSP29966 332 aaPredicted RBP16.9■□□□□ 0.3
PRKN-204ENST00000366896 TRDNQ13061 729 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 TAF1P21675 1872 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 ZRANB2O95218 330 aaKnown RBP eCLIP16.9■□□□□ 0.3
PRKN-204ENST00000366896 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
PRKN-204ENST00000366896 PLA2G4AP47712 749 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 XPO4Q9C0E2 1151 aaKnown RBP16.9■□□□□ 0.3
PRKN-204ENST00000366896 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
PRKN-204ENST00000366896 IFNKQ9P0W0 207 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 TUBE1Q9UJT0 475 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 HPSEQ9Y251 543 aa16.9■□□□□ 0.3
PRKN-204ENST00000366896 SMC2O95347 1197 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 ARHGAP29Q52LW3 1261 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 ELOA2Q8IYF1 753 aaPredicted RBP16.89■□□□□ 0.29
PRKN-204ENST00000366896 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 SFPQP23246 707 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRKN-204ENST00000366896 NCAPHQ15003 741 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 ISM2Q6H9L7 571 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 TMC6Q7Z403 805 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
PRKN-204ENST00000366896 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.89■□□□□ 0.29
PRKN-204ENST00000366896 KLRG2A4D1S0 409 aaPredicted RBP16.88■□□□□ 0.29
PRKN-204ENST00000366896 ZBTB7AO95365 584 aa16.88■□□□□ 0.29
PRKN-204ENST00000366896 ALX1Q15699 326 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms